YHAM_BACMK
ID YHAM_BACMK Reviewed; 314 AA.
AC A9VI37;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427};
GN OrderedLocusNames=BcerKBAB4_0927;
OS Bacillus mycoides (strain KBAB4) (Bacillus weihenstephanensis).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus;
OC Bacillus cereus group.
OX NCBI_TaxID=315730;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KBAB4;
RX PubMed=17434157; DOI=10.1016/j.cbi.2007.03.003;
RA Lapidus A., Goltsman E., Auger S., Galleron N., Segurens B., Dossat C.,
RA Land M.L., Broussolle V., Brillard J., Guinebretiere M.-H., Sanchis V.,
RA Nguen-the C., Lereclus D., Richardson P., Wincker P., Weissenbach J.,
RA Ehrlich S.D., Sorokin A.;
RT "Extending the Bacillus cereus group genomics to putative food-borne
RT pathogens of different toxicity.";
RL Chem. Biol. Interact. 171:236-249(2008).
CC -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC Rule:MF_01427}.
CC -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC Rule:MF_01427}.
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DR EMBL; CP000903; ABY42180.1; -; Genomic_DNA.
DR RefSeq; WP_012260489.1; NC_010184.1.
DR AlphaFoldDB; A9VI37; -.
DR SMR; A9VI37; -.
DR STRING; 315730.BcerKBAB4_0927; -.
DR EnsemblBacteria; ABY42180; ABY42180; BcerKBAB4_0927.
DR KEGG; bwe:BcerKBAB4_0927; -.
DR eggNOG; COG3481; Bacteria.
DR HOGENOM; CLU_056349_2_0_9; -.
DR OMA; NLVGHLV; -.
DR Proteomes; UP000002154; Chromosome.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd00077; HDc; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR004365; NA-bd_OB_tRNA.
DR Pfam; PF01966; HD; 1.
DR Pfam; PF01336; tRNA_anti-codon; 1.
DR SMART; SM00471; HDc; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS51831; HD; 1.
PE 3: Inferred from homology;
KW Exonuclease; Hydrolase; Nuclease.
FT CHAIN 1..314
FT /note="3'-5' exoribonuclease YhaM"
FT /id="PRO_1000145738"
FT DOMAIN 163..279
FT /note="HD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
SQ SEQUENCE 314 AA; 35605 MW; 62ADEF8A6317D3EA CRC64;
MKKKIVEYEV GEQVDVFLLI KTATKGLASN GKPFLTVILQ DPSGDIEAKL WDVSPEVEKQ
YVAETIVKVA GDILNYKGRI QLRVKQIRVA NENEVTDISD FVEKAPIKKE DMVEKITQYI
FEMRNPNIQR LTRHLLNKHQ NEFLEYPAAM KNHHEFVSGL AYHVVSMLDL AKAISALYPS
LDKDLLYAGV ILHDLGKVFE LSGPISTTYT LEGNLLGHIS IMVNEIGKAA EELQIDAEEV
LILQHIVLSH HGKAEWGSPK PPLVKEAEIL HYIDNLDAKM NMMDRALGRT KPGEYTERVF
ALDNRSFYKP TFHN