YHAM_LISMC
ID YHAM_LISMC Reviewed; 313 AA.
AC C1KXH5;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 26-MAY-2009, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427}; OrderedLocusNames=Lm4b_02247;
OS Listeria monocytogenes serotype 4b (strain CLIP80459).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.
OX NCBI_TaxID=568819;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIP80459;
RX PubMed=22530965; DOI=10.1186/1471-2164-13-144;
RA Hain T., Ghai R., Billion A., Kuenne C.T., Steinweg C., Izar B.,
RA Mohamed W., Mraheil M., Domann E., Schaffrath S., Karst U., Goesmann A.,
RA Oehm S., Puhler A., Merkl R., Vorwerk S., Glaser P., Garrido P.,
RA Rusniok C., Buchrieser C., Goebel W., Chakraborty T.;
RT "Comparative genomics and transcriptomics of lineages I, II, and III
RT strains of Listeria monocytogenes.";
RL BMC Genomics 13:144-144(2012).
CC -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC Rule:MF_01427}.
CC -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC Rule:MF_01427}.
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DR EMBL; FM242711; CAS06004.1; -; Genomic_DNA.
DR RefSeq; WP_003726774.1; NC_012488.1.
DR AlphaFoldDB; C1KXH5; -.
DR SMR; C1KXH5; -.
DR KEGG; lmc:Lm4b_02247; -.
DR HOGENOM; CLU_056349_2_0_9; -.
DR OMA; NLVGHLV; -.
DR BioCyc; LMON568819:LM4B_RS11360-MON; -.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR CDD; cd00077; HDc; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF01966; HD; 1.
DR PROSITE; PS51831; HD; 1.
PE 3: Inferred from homology;
KW Exonuclease; Hydrolase; Nuclease.
FT CHAIN 1..313
FT /note="3'-5' exoribonuclease YhaM"
FT /id="PRO_1000215269"
FT DOMAIN 163..279
FT /note="HD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
SQ SEQUENCE 313 AA; 35369 MW; EAD80CC368CEE3E0 CRC64;
MEKRLLDFEV GETVDLFLLI KSSVKGTASN GKPFLSLVLQ DKSGELEAKL WDVKESDEAN
YGVQQIVHLM GDIQNYRGRK QLKIRQIRQA TALDGVSASE FMETAPINKE EMADEITQYI
FEMKNANLQR ITRALLKKYQ DDFYDYPAAM RHHHEFVSGL SFHVVSMLRL AKSVADLYPS
VNRDLLYAGV ILHDLGKVIE LSGPVSTTYT LEGNLIGHIS IVVEEVSKIA DELSIDGEEV
VVLKHVLLSH HGKGEWGSPK PPLVREAEIL HQIDLMDASL NMMDKVLKHT KPGEFSERVF
GLDNRSFYNP IFE