ID   YHAM_LISMF              Reviewed;         313 AA.
AC   Q71XE5;
DT   02-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   25-MAY-2022, entry version 94.
DE   RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN   Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427};
GN   OrderedLocusNames=LMOf2365_2253;
OS   Listeria monocytogenes serotype 4b (strain F2365).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.
OX   NCBI_TaxID=265669;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=F2365;
RX   PubMed=15115801; DOI=10.1093/nar/gkh562;
RA   Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F.,
RA   Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T., Peterson J.D.,
RA   White O., Nelson W.C., Nierman W.C., Beanan M.J., Brinkac L.M.,
RA   Daugherty S.C., Dodson R.J., Durkin A.S., Madupu R., Haft D.H.,
RA   Selengut J., Van Aken S.E., Khouri H.M., Fedorova N., Forberger H.A.,
RA   Tran B., Kathariou S., Wonderling L.D., Uhlich G.A., Bayles D.O.,
RA   Luchansky J.B., Fraser C.M.;
RT   "Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne
RT   pathogen Listeria monocytogenes reveal new insights into the core genome
RT   components of this species.";
RL   Nucleic Acids Res. 32:2386-2395(2004).
CC   -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
CC   -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
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DR   EMBL; AE017262; AAT05020.1; -; Genomic_DNA.
DR   RefSeq; WP_003726774.1; NC_002973.6.
DR   AlphaFoldDB; Q71XE5; -.
DR   SMR; Q71XE5; -.
DR   KEGG; lmf:LMOf2365_2253; -.
DR   HOGENOM; CLU_056349_2_0_9; -.
DR   OMA; NLVGHLV; -.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00077; HDc; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR   InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF01966; HD; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Exonuclease; Hydrolase; Nuclease.
FT   CHAIN           1..313
FT                   /note="3'-5' exoribonuclease YhaM"
FT                   /id="PRO_0000109864"
FT   DOMAIN          163..279
FT                   /note="HD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT   DNA_BIND        22..90
FT                   /note="OB"
SQ   SEQUENCE   313 AA;  35369 MW;  EAD80CC368CEE3E0 CRC64;
     MEKRLLDFEV GETVDLFLLI KSSVKGTASN GKPFLSLVLQ DKSGELEAKL WDVKESDEAN
     YGVQQIVHLM GDIQNYRGRK QLKIRQIRQA TALDGVSASE FMETAPINKE EMADEITQYI
     FEMKNANLQR ITRALLKKYQ DDFYDYPAAM RHHHEFVSGL SFHVVSMLRL AKSVADLYPS
     VNRDLLYAGV ILHDLGKVIE LSGPVSTTYT LEGNLIGHIS IVVEEVSKIA DELSIDGEEV
     VVLKHVLLSH HGKGEWGSPK PPLVREAEIL HQIDLMDASL NMMDKVLKHT KPGEFSERVF
     GLDNRSFYNP IFE