ID   YHAM_LISMO              Reviewed;         313 AA.
AC   Q8Y556;
DT   02-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2002, sequence version 1.
DT   03-AUG-2022, entry version 107.
DE   RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN   Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427}; OrderedLocusNames=lmo2220;
OS   Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.
OX   NCBI_TaxID=169963;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-679 / EGD-e;
RX   PubMed=11679669; DOI=10.1126/science.1063447;
RA   Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F.,
RA   Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A.,
RA   Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E.,
RA   Dominguez-Bernal G., Duchaud E., Durant L., Dussurget O., Entian K.-D.,
RA   Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W.,
RA   Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U.,
RA   Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A.,
RA   Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B.,
RA   Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N.,
RA   Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P.;
RT   "Comparative genomics of Listeria species.";
RL   Science 294:849-852(2001).
CC   -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
CC   -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
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DR   EMBL; AL591982; CAD00298.1; -; Genomic_DNA.
DR   PIR; AD1352; AD1352.
DR   RefSeq; NP_465744.1; NC_003210.1.
DR   RefSeq; WP_009924694.1; NZ_CP023861.1.
DR   AlphaFoldDB; Q8Y556; -.
DR   SMR; Q8Y556; -.
DR   STRING; 169963.lmo2220; -.
DR   PaxDb; Q8Y556; -.
DR   EnsemblBacteria; CAD00298; CAD00298; CAD00298.
DR   GeneID; 986701; -.
DR   KEGG; lmo:lmo2220; -.
DR   PATRIC; fig|169963.11.peg.2272; -.
DR   eggNOG; COG3481; Bacteria.
DR   HOGENOM; CLU_056349_2_0_9; -.
DR   OMA; NLVGHLV; -.
DR   PhylomeDB; Q8Y556; -.
DR   BioCyc; LMON169963:LMO2220-MON; -.
DR   Proteomes; UP000000817; Chromosome.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0031125; P:rRNA 3'-end processing; IBA:GO_Central.
DR   CDD; cd00077; HDc; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR   InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF01966; HD; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT   CHAIN           1..313
FT                   /note="3'-5' exoribonuclease YhaM"
FT                   /id="PRO_0000109865"
FT   DOMAIN          163..279
FT                   /note="HD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT   DNA_BIND        22..90
FT                   /note="OB"
SQ   SEQUENCE   313 AA;  35356 MW;  EAD81D3368CEE3E0 CRC64;
     MEKRLLDFEV GETVDLFLLI KSSVKGTASN GKPFLSLVLQ DKSGELEAKL WDVKESDEAN
     YGVQQIVHLM GDIQNYRGRK QLKIRQIRQA TALDGVSASE FMETAPINKE EMADEITQYI
     FEMKNANLQR ITRALLKKYQ DDFYDYPAAM RHHHEFVSGL SFHVVSMLRL AKSVADLYPS
     VNRDLLYAGV ILHDLGKVIE LSGPVSTTYT LEGNLIGHIS IVVEEVSKIA DELSIDGEEV
     VVLKHVLLSH HGKGEWGSPK PPLVREAEIL HQIDLMDASL NMMDKVLKHT KPGEFSERVF
     GLDNRSFYNP TFE