YHAM_LISW6
ID YHAM_LISW6 Reviewed; 313 AA.
AC A0AKX3;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2006, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427}; OrderedLocusNames=lwe2237;
OS Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / CIP 8149 /
OS NCTC 11857 / SLCC 5334 / V8).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.
OX NCBI_TaxID=386043;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35897 / DSM 20650 / CIP 8149 / NCTC 11857 / SLCC 5334 / V8;
RX PubMed=16936040; DOI=10.1128/jb.00758-06;
RA Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S.,
RA Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O.,
RA Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T.,
RA Lampidis R., Kreft J., Goebel W., Chakraborty T.;
RT "Whole-genome sequence of Listeria welshimeri reveals common steps in
RT genome reduction with Listeria innocua as compared to Listeria
RT monocytogenes.";
RL J. Bacteriol. 188:7405-7415(2006).
CC -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC Rule:MF_01427}.
CC -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC Rule:MF_01427}.
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DR EMBL; AM263198; CAK21655.1; -; Genomic_DNA.
DR RefSeq; WP_011702988.1; NC_008555.1.
DR AlphaFoldDB; A0AKX3; -.
DR SMR; A0AKX3; -.
DR STRING; 386043.lwe2237; -.
DR EnsemblBacteria; CAK21655; CAK21655; lwe2237.
DR GeneID; 61190140; -.
DR KEGG; lwe:lwe2237; -.
DR eggNOG; COG3481; Bacteria.
DR HOGENOM; CLU_056349_2_0_9; -.
DR OMA; NLVGHLV; -.
DR OrthoDB; 2018439at2; -.
DR Proteomes; UP000000779; Chromosome.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR CDD; cd00077; HDc; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF01966; HD; 1.
DR PROSITE; PS51831; HD; 1.
PE 3: Inferred from homology;
KW Exonuclease; Hydrolase; Nuclease.
FT CHAIN 1..313
FT /note="3'-5' exoribonuclease YhaM"
FT /id="PRO_1000024349"
FT DOMAIN 163..279
FT /note="HD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
SQ SEQUENCE 313 AA; 35520 MW; 84E8F8EB08C20A9C CRC64;
MEKRLLDFEV GETVELFLLI KSSIKGTASN GKPFLSLVLQ DKSGELEAKL WDVKESDEVN
YGVQQIVHLI GDIQNYRGRK QLKIRQIRQA TPLDGVNASE FMETAPINKE EMADEITQYI
FEMKNANLQR ITRALLKKYQ DDFYDYPAAM RHHHEFVSGL SFHVVSMLRL AKAVSDLYPT
VNRDLLYAGV ILHDLGKVIE LSGPVSTTYT LEGNLIGHIS IVVEEVSKIA DELSIDDEEV
VVLKHVLLSH HGKGEWGSPK PPLVREAEIL HQIDLMDASI NMMDKVLKHT KPGEFSERVF
GLDNRSFYNP TFE