ID   YHAM_OCEIH              Reviewed;         317 AA.
AC   Q8CUG1;
DT   02-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   25-MAY-2022, entry version 107.
DE   RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN   Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427}; OrderedLocusNames=OB1146;
OS   Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC
OS   3954 / HTE831).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.
OX   NCBI_TaxID=221109;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831;
RX   PubMed=12235376; DOI=10.1093/nar/gkf526;
RA   Takami H., Takaki Y., Uchiyama I.;
RT   "Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge
RT   and its unexpected adaptive capabilities to extreme environments.";
RL   Nucleic Acids Res. 30:3927-3935(2002).
CC   -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
CC   -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
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DR   EMBL; BA000028; BAC13102.1; -; Genomic_DNA.
DR   RefSeq; WP_011065547.1; NC_004193.1.
DR   AlphaFoldDB; Q8CUG1; -.
DR   SMR; Q8CUG1; -.
DR   STRING; 221109.22776827; -.
DR   EnsemblBacteria; BAC13102; BAC13102; BAC13102.
DR   KEGG; oih:OB1146; -.
DR   eggNOG; COG3481; Bacteria.
DR   HOGENOM; CLU_056349_2_0_9; -.
DR   OMA; NLVGHLV; -.
DR   OrthoDB; 2018439at2; -.
DR   PhylomeDB; Q8CUG1; -.
DR   Proteomes; UP000000822; Chromosome.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00077; HDc; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR   InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR004365; NA-bd_OB_tRNA.
DR   Pfam; PF01966; HD; 1.
DR   Pfam; PF01336; tRNA_anti-codon; 1.
DR   SMART; SM00471; HDc; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT   CHAIN           1..317
FT                   /note="3'-5' exoribonuclease YhaM"
FT                   /id="PRO_0000109866"
FT   DOMAIN          163..279
FT                   /note="HD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT   DNA_BIND        17..90
FT                   /note="OB"
SQ   SEQUENCE   317 AA;  35933 MW;  CE966DB6D45B2B09 CRC64;
     MKNGIAFRTI GEEFDGFLLI KESTRGTTSN GKPFLTLILR DASGEIEAKL WDATKDDEET
     LIPEQIIQVT GEINQFRGKH QLKILSIRLS QPMDNVQVTD FLGKAPMEKE ELAEKLTEAI
     FEMENPKIQR LVRAFIKKYQ EELLTYPAAT KNHHEFASGL AYHVVSMLAI GKELHKLYPE
     INRDLLYAGI ILHDIGKIKE LSGVVSTTYT LEGKMLGHIP MMVEEIGLMA NELQIEGEEV
     LILKHLVLSH HGKAEWGSPT PPLVREAELL HLIDLIDAKM NMLGRALEKI QPGEFTERLF
     AMDNRAFYKP NFEENEG