YHCB_ECOLI
ID YHCB_ECOLI Reviewed; 132 AA.
AC P0ADW3; P39436; Q2M8Y0;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-DEC-2007, sequence version 2.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Inner membrane protein YhcB;
GN Name=yhcB; OrderedLocusNames=b3233, JW5539;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 8-132.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RA Bass S., Gu Q., Goddard A.;
RL Submitted (OCT-1994) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION.
RC STRAIN=BL21-DE3;
RX PubMed=16079137; DOI=10.1074/jbc.m506479200;
RA Stenberg F., Chovanec P., Maslen S.L., Robinson C.V., Ilag L.,
RA von Heijne G., Daley D.O.;
RT "Protein complexes of the Escherichia coli cell envelope.";
RL J. Biol. Chem. 280:34409-34419(2005).
RN [5]
RP DISRUPTION PHENOTYPE.
RX PubMed=16863643; DOI=10.1016/j.bbabio.2006.05.043;
RA Mogi T., Mizuochi-Asai E., Endou S., Akimoto S., Nakamura H.;
RT "Role of a putative third subunit YhcB on the assembly and function of
RT cytochrome bd-type ubiquinol oxidase from Escherichia coli.";
RL Biochim. Biophys. Acta 1757:860-864(2006).
RN [6]
RP SUBUNIT, SUBCELLULAR LOCATION, AND TOPOLOGY.
RC STRAIN=BL21-DE3;
RX PubMed=21210718; DOI=10.1021/pr101105c;
RA Maddalo G., Stenberg-Bruzell F., Gotzke H., Toddo S., Bjorkholm P.,
RA Eriksson H., Chovanec P., Genevaux P., Lehtio J., Ilag L.L., Daley D.O.;
RT "Systematic analysis of native membrane protein complexes in Escherichia
RT coli.";
RL J. Proteome Res. 10:1848-1859(2011).
CC -!- SUBUNIT: Forms homooligomers. {ECO:0000269|PubMed:21210718}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:16079137,
CC ECO:0000269|PubMed:21210718}; Single-pass membrane protein
CC {ECO:0000269|PubMed:16079137, ECO:0000269|PubMed:21210718}.
CC -!- DISRUPTION PHENOTYPE: No change in function or assembly of the
CC cytochrome bd-I complex. {ECO:0000269|PubMed:16863643}.
CC -!- SIMILARITY: To H.influenzae HI_1628. {ECO:0000305}.
CC -!- CAUTION: Was originally thought to be a member of the cytochrome bd-I
CC complex (PubMed:16079137). Subsequent work suggests this is not the
CC case (PubMed:16863643). {ECO:0000305|PubMed:16079137,
CC ECO:0000305|PubMed:16863643}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA58035.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; U18997; AAA58035.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC76265.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE77276.1; -; Genomic_DNA.
DR EMBL; U15661; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; C65115; C65115.
DR RefSeq; NP_417700.2; NC_000913.3.
DR RefSeq; WP_001295270.1; NZ_STEB01000012.1.
DR AlphaFoldDB; P0ADW3; -.
DR SMR; P0ADW3; -.
DR BioGRID; 4261916; 492.
DR DIP; DIP-39900N; -.
DR IntAct; P0ADW3; 1.
DR STRING; 511145.b3233; -.
DR jPOST; P0ADW3; -.
DR PaxDb; P0ADW3; -.
DR PRIDE; P0ADW3; -.
DR EnsemblBacteria; AAC76265; AAC76265; b3233.
DR EnsemblBacteria; BAE77276; BAE77276; BAE77276.
DR GeneID; 66672871; -.
DR GeneID; 947815; -.
DR KEGG; ecj:JW5539; -.
DR KEGG; eco:b3233; -.
DR PATRIC; fig|511145.12.peg.3330; -.
DR EchoBASE; EB2498; -.
DR eggNOG; COG3105; Bacteria.
DR HOGENOM; CLU_135606_1_0_6; -.
DR InParanoid; P0ADW3; -.
DR OMA; HMAKTSS; -.
DR PhylomeDB; P0ADW3; -.
DR BioCyc; EcoCyc:G7681-MON; -.
DR PRO; PR:P0ADW3; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005887; C:integral component of plasma membrane; ISM:EcoCyc.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR009386; DUF1043.
DR PANTHER; PTHR39579; PTHR39579; 1.
DR Pfam; PF06295; DUF1043; 1.
DR PIRSF; PIRSF006318; YhcB; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..132
FT /note="Inner membrane protein YhcB"
FT /id="PRO_0000169477"
FT TRANSMEM 1..21
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 22..132
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305|PubMed:21210718"
FT REGION 95..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 132 AA; 14961 MW; 6A57A58B5FD1C171 CRC64;
MTWEYALIGL VVGIIIGAVA MRFGNRKLRQ QQALQYELEK NKAELDEYRE ELVSHFARSA
ELLDTMAHDY RQLYQHMAKS SSSLLPELSA EANPFRNRLA ESEASNDQAP VQMPRDYSEG
ASGLLRTGAK RD