YHJC_ECOLI
ID YHJC_ECOLI Reviewed; 299 AA.
AC P37641; Q2M7I3;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-1998, sequence version 2.
DT 03-AUG-2022, entry version 142.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator YhjC;
GN Name=yhjC; OrderedLocusNames=b3521, JW3489;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=8041620; DOI=10.1093/nar/22.13.2576;
RA Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.;
RT "Analysis of the Escherichia coli genome. V. DNA sequence of the region
RT from 76.0 to 81.5 minutes.";
RL Nucleic Acids Res. 22:2576-2586(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB18497.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAE77773.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; U00039; AAB18497.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC76546.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE77773.1; ALT_INIT; Genomic_DNA.
DR PIR; S47741; S47741.
DR RefSeq; NP_417978.2; NC_000913.3.
DR RefSeq; WP_000357790.1; NZ_CP047127.1.
DR AlphaFoldDB; P37641; -.
DR SMR; P37641; -.
DR BioGRID; 4262157; 11.
DR DIP; DIP-12378N; -.
DR IntAct; P37641; 2.
DR STRING; 511145.b3521; -.
DR PaxDb; P37641; -.
DR PRIDE; P37641; -.
DR EnsemblBacteria; AAC76546; AAC76546; b3521.
DR EnsemblBacteria; BAE77773; BAE77773; BAE77773.
DR GeneID; 948035; -.
DR KEGG; ecj:JW3489; -.
DR KEGG; eco:b3521; -.
DR PATRIC; fig|511145.12.peg.3630; -.
DR EchoBASE; EB2158; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_3_6; -.
DR InParanoid; P37641; -.
DR OMA; HALIHYA; -.
DR PhylomeDB; P37641; -.
DR BioCyc; EcoCyc:EG12247-MON; -.
DR PRO; PR:P37641; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006351; P:transcription, DNA-templated; IBA:GO_Central.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..299
FT /note="Uncharacterized HTH-type transcriptional regulator
FT YhjC"
FT /id="PRO_0000105799"
FT DOMAIN 1..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00253"
FT DNA_BIND 19..38
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00253"
SQ SEQUENCE 299 AA; 33330 MW; 22D0EC5994CBC8C1 CRC64;
MDKIHAMQLF IKVAELESFS RAADFFALPK GSVSRQIQAL EHQLGTQLLQ RTTRRVKLTP
EGMTYYQRAK DVLSNLSELD GLFQQDATSI SGKLRIDIPP GIAKSLLLPR LSEFLYLHPG
IELELSSHDR PVDILHDGFD CVIRTGALPE DGVIARPLGK LTMVNCASPH YLTRFGYPQS
PDDLTSHAIV RYTPHLGVHP LGFEVASVNG VQWFKSGGML TVNSSENYLT AGLAGLGIIQ
IPRIAVREAL RAGRLIEVLP GYRAEPLSLS LVYPQRRELS RRVNLFMQWL AGVMKEYLD