YHP4_SCHPO
ID YHP4_SCHPO Reviewed; 589 AA.
AC Q9USP9; Q9UU06;
DT 29-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 125.
DE RecName: Full=Uncharacterized RNA-binding protein C902.04;
GN ORFNames=SPBC902.04;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 85-238, AND SUBCELLULAR
RP LOCATION.
RC STRAIN=ATCC 38364 / 968;
RX PubMed=10759889; DOI=10.1046/j.1365-2443.2000.00317.x;
RA Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T.,
RA Hiraoka Y.;
RT "Large-scale screening of intracellular protein localization in living
RT fission yeast cells by the use of a GFP-fusion genomic DNA library.";
RL Genes Cells 5:169-190(2000).
RN [3]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-330; THR-332 AND SER-334, AND
RP IDENTIFICATION BY MASS SPECTROMETRY.
RX PubMed=18257517; DOI=10.1021/pr7006335;
RA Wilson-Grady J.T., Villen J., Gygi S.P.;
RT "Phosphoproteome analysis of fission yeast.";
RL J. Proteome Res. 7:1088-1097(2008).
CC -!- INTERACTION:
CC Q9USP9; O14327: pab2; NbExp=2; IntAct=EBI-8993741, EBI-7997255;
CC Q9USP9; Q9UTR8: red1; NbExp=3; IntAct=EBI-8993741, EBI-1117407;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:10759889}.
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DR EMBL; CU329671; CAB62098.1; -; Genomic_DNA.
DR EMBL; AB027886; BAA87190.1; -; Genomic_DNA.
DR PIR; T50385; T50385.
DR RefSeq; NP_595202.1; NM_001021108.2.
DR AlphaFoldDB; Q9USP9; -.
DR SMR; Q9USP9; -.
DR BioGRID; 277794; 52.
DR IntAct; Q9USP9; 4.
DR STRING; 4896.SPBC902.04.1; -.
DR iPTMnet; Q9USP9; -.
DR MaxQB; Q9USP9; -.
DR PaxDb; Q9USP9; -.
DR EnsemblFungi; SPBC902.04.1; SPBC902.04.1:pep; SPBC902.04.
DR GeneID; 2541281; -.
DR KEGG; spo:SPBC902.04; -.
DR PomBase; SPBC902.04; -.
DR VEuPathDB; FungiDB:SPBC902.04; -.
DR eggNOG; KOG2135; Eukaryota.
DR HOGENOM; CLU_017928_1_0_1; -.
DR InParanoid; Q9USP9; -.
DR OMA; PSAKCAF; -.
DR PhylomeDB; Q9USP9; -.
DR PRO; PR:Q9USP9; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0000785; C:chromatin; IDA:PomBase.
DR GO; GO:0033620; C:Mei2 nuclear dot complex; IDA:PomBase.
DR GO; GO:1990477; C:MTREC complex; IDA:PomBase.
DR GO; GO:0016604; C:nuclear body; IDA:PomBase.
DR GO; GO:0005634; C:nucleus; IDA:PomBase.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0007129; P:homologous chromosome pairing at meiosis; EXP:PomBase.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:1902802; P:regulation of siRNA-dependent facultative heterochromatin assembly; IMP:PomBase.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002483; PWI_dom.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR045137; RBM26/27.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR14398; PTHR14398; 2.
DR Pfam; PF01480; PWI; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 1: Evidence at protein level;
KW Nucleus; Phosphoprotein; Reference proteome; RNA-binding.
FT CHAIN 1..589
FT /note="Uncharacterized RNA-binding protein C902.04"
FT /id="PRO_0000082026"
FT DOMAIN 242..314
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 322..348
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 443..465
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 566..589
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 327..348
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 443..464
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 566..581
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 330
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
FT MOD_RES 332
FT /note="Phosphothreonine"
FT /evidence="ECO:0000269|PubMed:18257517"
FT MOD_RES 334
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
SQ SEQUENCE 589 AA; 66899 MW; 6012DBEF0C6162CA CRC64;
MPLFLEEHAE YLKRYLEQAL EPISDADASV LSDYAMALLR HDSSEEEVRQ LCYSQLEDFL
RQETIPFVDK IFDVLREKSY LEGASNMPST GMVTEEVSRY SPTSSMIPAT NSMETNFNNS
LPAVGKTNTF PSQVPNMFGP PLYHPAATAP SEFMPSIPGF GNLPNPAMPP IPFLPFNPAA
QPPFPPPFKM RGKRGFGMRH EHNSELRRHS PGNRRFNPYK AYPQPHLGHR FSRNAGNDPT
STALEVRNIP EEHFNEENIR SFFSKFGVLE KVELNPTHHS CVLEFTSHEA ANNAWSSPEP
IFNNRFIKIF WYNPSKGFHN RPKKFASHKS PTTSDSSNVE SSEDVDPASL LQNEEFHKLI
EERQRQHEER LKRINANKKA LEELNQKKRE LAQQQLKEQE LLMQKIKETD RSGNKRLMLL
ETQHSLLKAE ADCLGLPVSN VSESPAASNG SHHPYASGLP QRGTNTFFRG RGRGRGDMFA
SMSIDNRPTK LRVINVSPEK NEALLQYLFT VGGYEEITEP STTERLISFQ NRNSAEKFFG
GVRNVEKLQE LELAWVPKTA VTTNTTSMET GESNTSDNMN IEVEEGRWR