YIBA_ECOLI
ID YIBA_ECOLI Reviewed; 280 AA.
AC P0ADK6; P24172; Q2M7Q7;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Protein YibA;
GN Name=yibA; OrderedLocusNames=b3594, JW3568;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=2403547; DOI=10.1128/jb.172.1.446-456.1990;
RA Feulner G., Gray J.A., Kirschman J.A., Lehner A.F., Sadosky A.B.,
RA Vlazny D.A., Zhang J., Zhao S., Hill C.W.;
RT "Structure of the rhsA locus from Escherichia coli K-12 and comparison of
RT rhsA with other members of the rhs multigene family.";
RL J. Bacteriol. 172:446-456(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=8041620; DOI=10.1093/nar/22.13.2576;
RA Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.;
RT "Analysis of the Escherichia coli genome. V. DNA sequence of the region
RT from 76.0 to 81.5 minutes.";
RL Nucleic Acids Res. 22:2576-2586(1994).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS).
RG Northeast structural genomics consortium (NESG);
RT "X-ray structure of YIBA_ECOLI northeast structural genomics consortium
RT target ET31.";
RL Submitted (JAN-2005) to the PDB data bank.
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DR EMBL; L19044; AAC95066.1; -; Genomic_DNA.
DR EMBL; U00039; AAB18571.1; -; Genomic_DNA.
DR EMBL; U00096; AAC76618.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77699.1; -; Genomic_DNA.
DR PIR; S47815; S47815.
DR RefSeq; NP_418051.1; NC_000913.3.
DR RefSeq; WP_000072850.1; NZ_SSZK01000022.1.
DR PDB; 1OYZ; X-ray; 2.10 A; A=1-280.
DR PDBsum; 1OYZ; -.
DR AlphaFoldDB; P0ADK6; -.
DR SMR; P0ADK6; -.
DR BioGRID; 4262559; 10.
DR BioGRID; 852415; 4.
DR DIP; DIP-48203N; -.
DR IntAct; P0ADK6; 11.
DR STRING; 511145.b3594; -.
DR jPOST; P0ADK6; -.
DR PaxDb; P0ADK6; -.
DR PRIDE; P0ADK6; -.
DR EnsemblBacteria; AAC76618; AAC76618; b3594.
DR EnsemblBacteria; BAE77699; BAE77699; BAE77699.
DR GeneID; 948108; -.
DR KEGG; ecj:JW3568; -.
DR KEGG; eco:b3594; -.
DR PATRIC; fig|1411691.4.peg.3113; -.
DR EchoBASE; EB1173; -.
DR eggNOG; COG1413; Bacteria.
DR HOGENOM; CLU_086608_0_0_6; -.
DR InParanoid; P0ADK6; -.
DR OMA; EDENLAW; -.
DR BioCyc; EcoCyc:EG11187-MON; -.
DR EvolutionaryTrace; P0ADK6; -.
DR PRO; PR:P0ADK6; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016491; F:oxidoreductase activity; IBA:GO_Central.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IMP:EcoCyc.
DR GO; GO:0046677; P:response to antibiotic; IMP:EcoCyc.
DR GO; GO:0009314; P:response to radiation; IMP:EcoCyc.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR004155; PBS_lyase_HEAT.
DR Pfam; PF03130; HEAT_PBS; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..280
FT /note="Protein YibA"
FT /id="PRO_0000169604"
FT HELIX 14..21
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 25..31
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 37..50
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 53..63
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 68..80
FT /evidence="ECO:0007829|PDB:1OYZ"
FT TURN 85..87
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 88..101
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 105..121
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 123..125
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 126..136
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 142..153
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 161..168
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 173..186
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 191..200
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 206..218
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 222..224
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 225..232
FT /evidence="ECO:0007829|PDB:1OYZ"
FT STRAND 234..236
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 239..248
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 251..253
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 254..261
FT /evidence="ECO:0007829|PDB:1OYZ"
FT HELIX 268..277
FT /evidence="ECO:0007829|PDB:1OYZ"
SQ SEQUENCE 280 AA; 31874 MW; 54A83B1C21889035 CRC64;
MSNTYQKRKA SKEYGLYNQC KKLNDDELFR LLDDHNSLKR ISSARVLQLR GGQDAVRLAI
EFCSDKNYIR RDIGAFILGQ IKICKKCEDN VFNILNNMAL NDKSACVRAT AIESTAQRCK
KNPIYSPKIV EQSQITAFDK STNVRRATAF AISVINDKAT IPLLINLLKD PNGDVRNWAA
FAININKYDN SDIRDCFVEM LQDKNEEVRI EAIIGLSYRK DKRVLSVLCD ELKKNTVYDD
IIEAAGELGD KTLLPVLDTM LYKFDDNEII TSAIDKLKRS
