YIBH_ECOLI
ID YIBH_ECOLI Reviewed; 378 AA.
AC P0AFV0; P32107; Q2M7R0;
DT 20-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 20-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Inner membrane protein YibH;
GN Name=yibH; OrderedLocusNames=b3597, JW3571;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=8387990; DOI=10.1128/jb.175.10.2799-2808.1993;
RA Zhao S., Sandt C.H., Feulner G., Vlazny D.A., Gray J.A., Hill C.W.;
RT "Rhs elements of Escherichia coli K-12: complex composites of shared and
RT unique components that have different evolutionary histories.";
RL J. Bacteriol. 175:2799-2808(1993).
RN [2]
RP SEQUENCE REVISION TO 205.
RC STRAIN=K12;
RA Hill C.W.;
RL Submitted (JUN-1993) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=8041620; DOI=10.1093/nar/22.13.2576;
RA Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.;
RT "Analysis of the Escherichia coli genome. V. DNA sequence of the region
RT from 76.0 to 81.5 minutes.";
RL Nucleic Acids Res. 22:2576-2586(1994).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [6]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the membrane fusion protein (MFP) (TC 8.A.1)
CC family. {ECO:0000305}.
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DR EMBL; L19044; AAC95068.1; -; Genomic_DNA.
DR EMBL; U00039; AAB18574.1; -; Genomic_DNA.
DR EMBL; U00096; AAC76621.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77696.1; -; Genomic_DNA.
DR PIR; S47818; S47818.
DR RefSeq; NP_418054.1; NC_000913.3.
DR RefSeq; WP_000364939.1; NZ_STEB01000024.1.
DR AlphaFoldDB; P0AFV0; -.
DR SMR; P0AFV0; -.
DR BioGRID; 4261667; 268.
DR STRING; 511145.b3597; -.
DR PaxDb; P0AFV0; -.
DR PRIDE; P0AFV0; -.
DR EnsemblBacteria; AAC76621; AAC76621; b3597.
DR EnsemblBacteria; BAE77696; BAE77696; BAE77696.
DR GeneID; 66672508; -.
DR GeneID; 948110; -.
DR KEGG; ecj:JW3571; -.
DR KEGG; eco:b3597; -.
DR PATRIC; fig|511145.12.peg.3715; -.
DR EchoBASE; EB1714; -.
DR eggNOG; COG1566; Bacteria.
DR HOGENOM; CLU_018816_15_3_6; -.
DR InParanoid; P0AFV0; -.
DR OMA; AWAIFKI; -.
DR PhylomeDB; P0AFV0; -.
DR BioCyc; EcoCyc:EG11764-MON; -.
DR PRO; PR:P0AFV0; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IEP:EcoliWiki.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR InterPro; IPR043602; CusB_dom_1.
DR InterPro; IPR032317; HlyD_D23.
DR Pfam; PF00529; CusB_dom_1; 1.
DR Pfam; PF16576; HlyD_D23; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..378
FT /note="Inner membrane protein YibH"
FT /id="PRO_0000201895"
FT TOPO_DOM 1..3
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 4..24
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 25..26
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 27..47
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 48..54
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 55..75
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 76..232
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 233..253
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 254..280
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 281..301
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 302..309
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 310..330
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 331..378
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 378 AA; 41988 MW; 19FB46D698357EA0 CRC64;
MDLLIVLTYV ALAWAVFKIF RIPVNQWTLA TAALGGVFLV SGLILLMNYN HPYTFTAQKA
VIAIPITPQV TGIVTEVTDK NNQLIQKGEV LFKLDPVRYQ ARVDRLQADL MTATHNIKTL
RAQLTEAQAN TTQVSAERDR LFKNYQRYLK GSQAAVNPFS ERDIDDARQN FLAQDALVKG
SVAEQAQIQS QLDSMVNGEQ SQIVSLRAQL TEAKYNLEQT VIRAPSNGYV TQVLIRPGTY
AAALPLRPVM VFIPEQKRQI VAQFRQNSLL RLKPGDDAEV VFNALPGQVF HGKLTSILPV
VPGGSYQAQG VLQSLTVVPG TDGVLGTIEL DPNDDIDALP DGIYAQVAVY SDHFSHVSVM
RKVLLRMTSW MHYLYLDH
