YIBJ_ECOLI
ID YIBJ_ECOLI Reviewed; 233 AA.
AC P32109; P76717; Q2M7Q8;
DT 01-OCT-1993, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 3.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Putative uncharacterized protein YibJ;
GN Name=yibJ; Synonyms=rhsJ; OrderedLocusNames=b3595, JW5647;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=8387990; DOI=10.1128/jb.175.10.2799-2808.1993;
RA Zhao S., Sandt C.H., Feulner G., Vlazny D.A., Gray J.A., Hill C.W.;
RT "Rhs elements of Escherichia coli K-12: complex composites of shared and
RT unique components that have different evolutionary histories.";
RL J. Bacteriol. 175:2799-2808(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=8041620; DOI=10.1093/nar/22.13.2576;
RA Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.;
RT "Analysis of the Escherichia coli genome. V. DNA sequence of the region
RT from 76.0 to 81.5 minutes.";
RL Nucleic Acids Res. 22:2576-2586(1994).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP SEQUENCE REVISION.
RX PubMed=16397293; DOI=10.1093/nar/gkj405;
RA Riley M., Abe T., Arnaud M.B., Berlyn M.K.B., Blattner F.R.,
RA Chaudhuri R.R., Glasner J.D., Horiuchi T., Keseler I.M., Kosuge T.,
RA Mori H., Perna N.T., Plunkett G. III, Rudd K.E., Serres M.H., Thomas G.H.,
RA Thomson N.R., Wishart D., Wanner B.L.;
RT "Escherichia coli K-12: a cooperatively developed annotation snapshot
RT -- 2005.";
RL Nucleic Acids Res. 34:1-9(2006).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- SIMILARITY: Belongs to the RHS family. {ECO:0000305}.
CC -!- CAUTION: Could be the product of a pseudogene. {ECO:0000305}.
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DR EMBL; L19044; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U00039; AAB18572.1; -; Genomic_DNA.
DR EMBL; U00096; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP009048; BAE77698.1; -; Genomic_DNA.
DR PIR; E65159; E65159.
DR AlphaFoldDB; P32109; -.
DR SMR; P32109; -.
DR BioGRID; 4261668; 82.
DR STRING; 316407.85676448; -.
DR PRIDE; P32109; -.
DR EnsemblBacteria; BAE77698; BAE77698; BAE77698.
DR KEGG; ecj:JW5647; -.
DR EchoBASE; EB1716; -.
DR eggNOG; COG3209; Bacteria.
DR HOGENOM; CLU_001218_4_12_6; -.
DR PhylomeDB; P32109; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR InterPro; IPR001826; RHS.
DR InterPro; IPR022385; Rhs_assc_core.
DR Pfam; PF03527; RHS; 1.
DR PRINTS; PR00394; RHSPROTEIN.
DR TIGRFAMs; TIGR03696; Rhs_assc_core; 1.
PE 5: Uncertain;
KW Reference proteome.
FT CHAIN 1..233
FT /note="Putative uncharacterized protein YibJ"
FT /id="PRO_0000169607"
FT CONFLICT 65
FT /note="T -> K (in Ref. 2; AAB18572)"
FT /evidence="ECO:0000305"
FT CONFLICT 68..70
FT /note="ATA -> TTE (in Ref. 2; AAB18572)"
FT /evidence="ECO:0000305"
FT CONFLICT 83..84
FT /note="SD -> NE (in Ref. 2; AAB18572)"
FT /evidence="ECO:0000305"
FT CONFLICT 89
FT /note="H -> Q (in Ref. 2; AAB18572)"
FT /evidence="ECO:0000305"
FT CONFLICT 119
FT /note="L -> Q (in Ref. 2; AAB18572)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 233 AA; 26447 MW; 33792563C4A7F3AB CRC64;
MQMLDRLESE ILADRVSEES RRWLASCGLT VEQMKNQMDP VYTPARKIHL YHCDHRGLPL
ALISTEGATA WCAEYDEWGN LLSDENPHHL QQLIRLPGQQ YDEESGLYYN RHRYYDPLLG
RYITQDPIGL KGGWNFYQYP LNPVINVDPQ GLVDINLYPE SDLIHSVADE INIPGVFTIG
GHGTPTSIES ATRSIMTAKD LAYLIKFDGN YKDGMTVWLF SCNTGKGQNS FAS