YIDC_SYNY3
ID YIDC_SYNY3 Reviewed; 384 AA.
AC P74155;
DT 21-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Membrane protein insertase YidC;
DE AltName: Full=Alb3;
DE AltName: Full=Foldase YidC;
DE AltName: Full=Membrane integrase YidC;
DE AltName: Full=Membrane protein YidC;
DE AltName: Full=Oxa1;
DE AltName: Full=SynYidC;
GN Name=yidC; Synonyms=alb3; OrderedLocusNames=slr1471;
OS Synechocystis sp. (strain PCC 6803 / Kazusa).
OC Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis;
OC unclassified Synechocystis.
OX NCBI_TaxID=1111708;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 6803 / Kazusa;
RX PubMed=8905231; DOI=10.1093/dnares/3.3.109;
RA Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y.,
RA Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T.,
RA Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.,
RA Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence analysis of the genome of the unicellular cyanobacterium
RT Synechocystis sp. strain PCC6803. II. Sequence determination of the entire
RT genome and assignment of potential protein-coding regions.";
RL DNA Res. 3:109-136(1996).
RN [2]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=15498761; DOI=10.1074/jbc.m411041200;
RA Spence E., Bailey S., Nenninger A., Moller S.G., Robinson C.;
RT "A homolog of Albino3/OxaI is essential for thylakoid biogenesis in the
RT cyanobacterium Synechocystis sp. PCC6803.";
RL J. Biol. Chem. 279:55792-55800(2004).
RN [3]
RP FUNCTION IN ASSEMBLY OF D1, INTERACTION WITH D1, AND SUBCELLULAR LOCATION.
RC STRAIN=ATCC 27184 / PCC 6803 / N-1;
RX PubMed=16905652; DOI=10.1105/tpc.106.043646;
RA Ossenbuhl F., Inaba-Sulpice M., Meurer J., Soll J., Eichacker L.A.;
RT "The synechocystis sp PCC 6803 oxa1 homolog is essential for membrane
RT integration of reaction center precursor protein pD1.";
RL Plant Cell 18:2236-2246(2006).
RN [4]
RP SUBCELLULAR LOCATION.
RC STRAIN=ATCC 27184 / PCC 6803 / N-1;
RX PubMed=18600052;
RA Sven G., Eva R., Uwe K., Schneider D.;
RT "A conserved structure and function of the YidC homologous protein Slr1471
RT from Synechocystis sp. PCC 6803.";
RL J. Microbiol. Biotechnol. 18:1090-1094(2008).
RN [5]
RP INTERACTION WITH CYANOP; FTHS2; FTSH3; PHB1; YCF39 AND YCF48, AND SUBUNIT.
RC STRAIN=PCC 6803 / Kazusa;
RX PubMed=30061392; DOI=10.1073/pnas.1800609115;
RA Yu J., Knoppova J., Michoux F., Bialek W., Cota E., Shukla M.K.,
RA Straskova A., Pascual Aznar G., Sobotka R., Komenda J., Murray J.W.,
RA Nixon P.J.;
RT "Ycf48 involved in the biogenesis of the oxygen-evolving photosystem II
RT complex is a seven-bladed beta-propeller protein.";
RL Proc. Natl. Acad. Sci. U.S.A. 115:E7824-E7833(2018).
CC -!- FUNCTION: Required for the insertion of integral membrane proteins into
CC the membrane. Probably plays an essential role in the integration of
CC proteins of the respiratory chain complexes. Involved in integration of
CC membrane proteins that insert dependently and independently of the Sec
CC translocase complex (By similarity). Addition of green fluorescent
CC protein (GFP) to the C-terminus leads to photoinhibition at 80
CC umol/m(2)/s light intensity, reduced amounts of pigment, altered energy
CC transfer between the antenna systems and the reaction centers of PSI
CC and PSII, and impaired integration of PSII reaction center protein D1
CC (psbA) into membranes, suggesting it probably also aids protein
CC insertion, folding and/or assembly of membrane complexes destined for
CC the thylakoid (PubMed:15498761, PubMed:16905652).
CC {ECO:0000250|UniProtKB:P25714, ECO:0000269|PubMed:15498761,
CC ECO:0000269|PubMed:16905652}.
CC -!- SUBUNIT: Specifically interacts with transmembrane segments of nascent
CC integral membrane proteins during membrane integration (By similarity).
CC Interacts with the precursor of PSII reaction center D1
CC (PubMed:16905652). Coimmunoprecipitates with CyanoP (tlr2075), FtsH2,
CC FtsH3, Phb1 (slr1106), Ycf39 and Ycf48 (PubMed:30061392).
CC {ECO:0000250|UniProtKB:P25714, ECO:0000269|PubMed:16905652,
CC ECO:0000269|PubMed:30061392}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:16905652,
CC ECO:0000269|PubMed:18600052}; Multi-pass membrane protein
CC {ECO:0000269|PubMed:16905652, ECO:0000269|PubMed:18600052}.
CC -!- DISRUPTION PHENOTYPE: Merodiplod cells have greatly altered thylakoid
CC morphology, and about 40% photosynthetic pigements, photosynthetic
CC electron transport and oxygen evolution. {ECO:0000269|PubMed:15498761}.
CC -!- SIMILARITY: Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
CC {ECO:0000305}.
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DR EMBL; BA000022; BAA18244.1; -; Genomic_DNA.
DR PIR; S75683; S75683.
DR AlphaFoldDB; P74155; -.
DR IntAct; P74155; 19.
DR STRING; 1148.1653329; -.
DR PaxDb; P74155; -.
DR EnsemblBacteria; BAA18244; BAA18244; BAA18244.
DR KEGG; syn:slr1471; -.
DR eggNOG; COG0706; Bacteria.
DR InParanoid; P74155; -.
DR OMA; KITPVMI; -.
DR Proteomes; UP000001425; Chromosome.
DR GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR GO; GO:0032977; F:membrane insertase activity; IBA:GO_Central.
DR GO; GO:0051205; P:protein insertion into membrane; IBA:GO_Central.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR InterPro; IPR028055; Membr_insert_YidC/Oxa1_C.
DR InterPro; IPR001708; YidC/ALB3/OXA1/COX18.
DR PANTHER; PTHR12428; PTHR12428; 1.
DR Pfam; PF02096; 60KD_IMP; 1.
DR TIGRFAMs; TIGR03592; yidC_oxa1_cterm; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Chaperone; Membrane; Protein transport;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..384
FT /note="Membrane protein insertase YidC"
FT /id="PRO_0000124759"
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 96..116
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 311..331
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 357..384
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 368..384
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 384 AA; 42627 MW; A90CEE83C43C12C0 CRC64;
MDFGIGFIST NIMLPILDFF FGIVHSYGFA IIALTLVIRL GLYPLSAGQI RNMRKMRITQ
PLMKERQEEI QKRYKDDPAK QQEEMAKVMK EFGNPLAGCL PLLLQMPILF ALFATLRGSP
FSDINYTVDL QILPQEQVER IVPQTFSTKP QNIYVDEALH YPIAVFLPGG KMLGVGEKTQ
LEIQSTEGKA FNQVIPEKNS QILTPTYSVT KGEDRISVNP DGTIEALVPG DATVQVTIPG
IAARTGFLFI KALGQVGVTG ENGEINWDIL GMIVFFGFSI YLNQELSGAS GGGAPNAQAQ
QQQTINKITP ILFSGMFLFF PLPAGVLMYI VMANVFQTIQ TLILMREPLP ENLQKLLDEQ
QKATQGRESL PFEKKSSKKK EKTS
