CBID_METM5
ID CBID_METM5 Reviewed; 365 AA.
AC A4FWX4;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 17-APR-2007, sequence version 1.
DT 25-MAY-2022, entry version 77.
DE RecName: Full=Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00787};
DE EC=2.1.1.195 {ECO:0000255|HAMAP-Rule:MF_00787};
DE AltName: Full=Cobalt-precorrin-6A synthase {ECO:0000255|HAMAP-Rule:MF_00787};
GN Name=cbiD {ECO:0000255|HAMAP-Rule:MF_00787}; OrderedLocusNames=MmarC5_0387;
OS Methanococcus maripaludis (strain C5 / ATCC BAA-1333).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanococcaceae; Methanococcus.
OX NCBI_TaxID=402880;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C5 / ATCC BAA-1333;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C.,
RA Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P.;
RT "Complete sequence of chromosome of Methanococcus maripaludis C5.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes the methylation of C-1 in cobalt-precorrin-5B to
CC form cobalt-precorrin-6A. {ECO:0000255|HAMAP-Rule:MF_00787}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Co-precorrin-5B + S-adenosyl-L-methionine = Co-precorrin-6A +
CC S-adenosyl-L-homocysteine; Xref=Rhea:RHEA:26285, ChEBI:CHEBI:57856,
CC ChEBI:CHEBI:59789, ChEBI:CHEBI:60063, ChEBI:CHEBI:60064;
CC EC=2.1.1.195; Evidence={ECO:0000255|HAMAP-Rule:MF_00787};
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis;
CC cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route):
CC step 6/10. {ECO:0000255|HAMAP-Rule:MF_00787}.
CC -!- SIMILARITY: Belongs to the CbiD family. {ECO:0000255|HAMAP-
CC Rule:MF_00787}.
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DR EMBL; CP000609; ABO34703.1; -; Genomic_DNA.
DR RefSeq; WP_011868158.1; NC_009135.1.
DR AlphaFoldDB; A4FWX4; -.
DR SMR; A4FWX4; -.
DR STRING; 402880.MmarC5_0387; -.
DR PRIDE; A4FWX4; -.
DR EnsemblBacteria; ABO34703; ABO34703; MmarC5_0387.
DR GeneID; 4928999; -.
DR KEGG; mmq:MmarC5_0387; -.
DR eggNOG; arCOG04383; Archaea.
DR HOGENOM; CLU_041273_1_0_2; -.
DR OMA; YHGKLIK; -.
DR OrthoDB; 57676at2157; -.
DR UniPathway; UPA00148; UER00227.
DR Proteomes; UP000000253; Chromosome.
DR GO; GO:0043780; F:cobalt-precorrin-5B C1-methyltransferase activity; IEA:RHEA.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0046140; P:corrin biosynthetic process; IEA:UniProtKB-UniRule.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR Gene3D; 3.30.2110.10; -; 1.
DR HAMAP; MF_00787; CbiD; 1.
DR InterPro; IPR002748; CbiD.
DR InterPro; IPR036074; CbiD_sf.
DR PANTHER; PTHR35863; PTHR35863; 1.
DR Pfam; PF01888; CbiD; 1.
DR PIRSF; PIRSF026782; CbiD; 1.
DR SUPFAM; SSF111342; SSF111342; 1.
DR TIGRFAMs; TIGR00312; cbiD; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Methyltransferase; S-adenosyl-L-methionine;
KW Transferase.
FT CHAIN 1..365
FT /note="Cobalt-precorrin-5B C(1)-methyltransferase"
FT /id="PRO_1000046864"
SQ SEQUENCE 365 AA; 39986 MW; 6E4F8E3A6C4CC452 CRC64;
MNKIDFRLEK TFGYTTGACA AAGSYSALYF LKNNKKLDFV EILNLKGDSL IIPIKNIEKQ
GNTAISTVEK FSGEDIDITN GMDIKIKVTL ENMDNNCSKS SNVKIIGGTG VGFITKSGLQ
VKPGKPAINP KPREMIETNL KSLLKDNECV TVKISVPNGD EIAKKTLNPK LGIIGGISIL
GTTGIVRPMS NDAYKESLAP QIDVALANNF KNLIFVPGNI GTKHAKILLN AEEDQIIEVS
NFWDHMLDKA KEKGVKDITV FGHAGKIVKL AGGIFDTHSR VADARNEILC AYTSLATQDV
KILQKILQSN TTEDIVEILI EKGILTEVFE KVSKRVVERL SLRWEGINFS CIIIDMEGNI
LGKYV