YIGZ_ECOLI
ID YIGZ_ECOLI Reviewed; 204 AA.
AC P27862; Q2M8F1;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2001, sequence version 2.
DT 03-AUG-2022, entry version 164.
DE RecName: Full=IMPACT family member YigZ;
GN Name=yigZ; OrderedLocusNames=b3848, JW5577;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=2243799; DOI=10.1093/nar/18.21.6439;
RA Nakahigashi K., Inokuchi H.;
RT "Nucleotide sequence between the fadB gene and the rrnA operon from
RT Escherichia coli.";
RL Nucleic Acids Res. 18:6439-6439(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=1379743; DOI=10.1126/science.1379743;
RA Daniels D.L., Plunkett G. III, Burland V.D., Blattner F.R.;
RT "Analysis of the Escherichia coli genome: DNA sequence of the region from
RT 84.5 to 86.5 minutes.";
RL Science 257:771-778(1992).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP SIMILARITY.
RX PubMed=8313894; DOI=10.1002/j.1460-2075.1994.tb06287.x;
RA Koonin E.V., Bork P., Sander C.;
RT "Yeast chromosome III: new gene functions.";
RL EMBO J. 13:493-503(1994).
RN [6]
RP X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS), AND SUBUNIT.
RX PubMed=15103642; DOI=10.1002/prot.20087;
RA Park F., Gajiwala K., Eroshkina G., Furlong E., He D., Batiyenko Y.,
RA Romero R., Christopher J., Badger J., Hendle J., Lin J., Peat T.,
RA Buchanan S.;
RT "Crystal structure of YIGZ, a conserved hypothetical protein from
RT Escherichia coli K12 with a novel fold.";
RL Proteins 55:775-777(2004).
CC -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:15103642}.
CC -!- INTERACTION:
CC P27862; P0DTT0: bipA; NbExp=2; IntAct=EBI-561235, EBI-562154;
CC P27862; P06612: topA; NbExp=3; IntAct=EBI-561235, EBI-544172;
CC -!- SIMILARITY: Belongs to the IMPACT family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA67645.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
CC Sequence=CAA38501.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; X54687; CAA38501.1; ALT_INIT; Genomic_DNA.
DR EMBL; M87049; AAA67645.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC76851.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE77455.1; -; Genomic_DNA.
DR PIR; S30739; S30739.
DR RefSeq; NP_418290.4; NC_000913.3.
DR RefSeq; WP_001308167.1; NZ_SSZK01000046.1.
DR PDB; 1VI7; X-ray; 2.80 A; A=1-204.
DR PDBsum; 1VI7; -.
DR AlphaFoldDB; P27862; -.
DR SMR; P27862; -.
DR BioGRID; 4261837; 44.
DR BioGRID; 852631; 1.
DR DIP; DIP-12487N; -.
DR IntAct; P27862; 3.
DR STRING; 511145.b3848; -.
DR MEROPS; M24.003; -.
DR jPOST; P27862; -.
DR PaxDb; P27862; -.
DR PRIDE; P27862; -.
DR DNASU; 948334; -.
DR EnsemblBacteria; AAC76851; AAC76851; b3848.
DR EnsemblBacteria; BAE77455; BAE77455; BAE77455.
DR GeneID; 948334; -.
DR KEGG; ecj:JW5577; -.
DR KEGG; eco:b3848; -.
DR PATRIC; fig|511145.12.peg.3962; -.
DR EchoBASE; EB1447; -.
DR eggNOG; COG1739; Bacteria.
DR HOGENOM; CLU_083552_0_0_6; -.
DR InParanoid; P27862; -.
DR OMA; VTVDHQR; -.
DR PhylomeDB; P27862; -.
DR BioCyc; EcoCyc:EG11484-MON; -.
DR EvolutionaryTrace; P27862; -.
DR PRO; PR:P27862; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0006446; P:regulation of translational initiation; IBA:GO_Central.
DR Gene3D; 3.30.230.30; -; 1.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR023582; Impact.
DR InterPro; IPR015796; Impact_bac/arc.
DR InterPro; IPR001498; Impact_N.
DR InterPro; IPR036956; Impact_N_sf.
DR InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR InterPro; IPR015269; UPF0029_Impact_C.
DR InterPro; IPR020569; UPF0029_Impact_CS.
DR PANTHER; PTHR16301; PTHR16301; 1.
DR Pfam; PF09186; DUF1949; 1.
DR Pfam; PF01205; UPF0029; 1.
DR SUPFAM; SSF54211; SSF54211; 1.
DR SUPFAM; SSF54980; SSF54980; 1.
DR TIGRFAMs; TIGR00257; IMPACT_YIGZ; 1.
DR PROSITE; PS00910; UPF0029; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..204
FT /note="IMPACT family member YigZ"
FT /id="PRO_0000207659"
FT CONFLICT 125
FT /note="L -> V (in Ref. 1; CAA38501)"
FT /evidence="ECO:0000305"
FT STRAND 4..9
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 11..17
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 20..28
FT /evidence="ECO:0007829|PDB:1VI7"
FT HELIX 31..45
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 54..57
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 62..64
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 68..70
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 78..80
FT /evidence="ECO:0007829|PDB:1VI7"
FT HELIX 81..90
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 94..98
FT /evidence="ECO:0007829|PDB:1VI7"
FT HELIX 110..125
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 130..133
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 137..143
FT /evidence="ECO:0007829|PDB:1VI7"
FT TURN 145..147
FT /evidence="ECO:0007829|PDB:1VI7"
FT HELIX 148..157
FT /evidence="ECO:0007829|PDB:1VI7"
FT STRAND 161..177
FT /evidence="ECO:0007829|PDB:1VI7"
FT HELIX 182..192
FT /evidence="ECO:0007829|PDB:1VI7"
FT TURN 193..195
FT /evidence="ECO:0007829|PDB:1VI7"
SQ SEQUENCE 204 AA; 21757 MW; 97E48163FE899DBE CRC64;
MESWLIPAAP VTVVEEIKKS RFITMLAHTD GVEAAKAFVE SVRAEHPDAR HHCVAWVAGA
PDDSQQLGFS DDGEPAGTAG KPMLAQLMGS GVGEITAVVV RYYGGILLGT GGLVKAYGGG
VNQALRQLTT QRKTPLTEYT LQCEYHQLTG IEALLGQCDG KIINSDYQAF VLLRVALPAA
KVAEFSAKLA DFSRGSLQLL AIEE
