YIPC_SCHPO
ID YIPC_SCHPO Reviewed; 507 AA.
AC Q9UT85;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 140.
DE RecName: Full=Uncharacterized WD repeat-containing protein C343.04c;
GN ORFNames=SPAC343.04c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus
CC {ECO:0000269|PubMed:16823372}.
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DR EMBL; CU329670; CAB52267.1; -; Genomic_DNA.
DR PIR; T38653; T38653.
DR RefSeq; NP_593424.1; NM_001018857.2.
DR AlphaFoldDB; Q9UT85; -.
DR SMR; Q9UT85; -.
DR BioGRID; 279512; 17.
DR STRING; 4896.SPAC343.04c.1; -.
DR iPTMnet; Q9UT85; -.
DR MaxQB; Q9UT85; -.
DR PaxDb; Q9UT85; -.
DR PRIDE; Q9UT85; -.
DR EnsemblFungi; SPAC343.04c.1; SPAC343.04c.1:pep; SPAC343.04c.
DR GeneID; 2543079; -.
DR KEGG; spo:SPAC343.04c; -.
DR PomBase; SPAC343.04c; -.
DR VEuPathDB; FungiDB:SPAC343.04c; -.
DR eggNOG; KOG0293; Eukaryota.
DR HOGENOM; CLU_000288_57_25_1; -.
DR InParanoid; Q9UT85; -.
DR OMA; YCKFSPD; -.
DR PhylomeDB; Q9UT85; -.
DR PRO; PR:Q9UT85; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0034657; C:GID complex; ISO:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0045721; P:negative regulation of gluconeogenesis; ISO:PomBase.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; ISO:PomBase.
DR Gene3D; 2.130.10.10; -; 3.
DR InterPro; IPR006595; CTLH_C.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00668; CTLH; 1.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS50897; CTLH; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Cytoplasm; Nucleus; Reference proteome; Repeat; WD repeat.
FT CHAIN 1..507
FT /note="Uncharacterized WD repeat-containing protein
FT C343.04c"
FT /id="PRO_0000343433"
FT DOMAIN 7..39
FT /note="LisH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00126"
FT DOMAIN 40..97
FT /note="CTLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00058"
FT REPEAT 211..250
FT /note="WD 1"
FT REPEAT 253..292
FT /note="WD 2"
FT REPEAT 294..334
FT /note="WD 3"
FT REPEAT 342..381
FT /note="WD 4"
FT REPEAT 425..467
FT /note="WD 5"
FT REPEAT 468..507
FT /note="WD 6"
SQ SEQUENCE 507 AA; 58404 MW; C15DE56D8074D91B CRC64;
MALDEKFQLE VIHLLLQFLN DYGYDESLKA LEKETGLVSE TEDVKRLKQA VLQGDWITAE
AAFSIMQLRD ESKRKEAQFL LQKQRCLELA RSGAICEAIY VLQNFESTDF NKEKERLVSI
ILESNNKSNN ELITKNGYGN TRLDLLNQLS EYISPEILLP KRRLEHLLQQ AKDYQVSSQV
YHNVLKNFSF LSDYKADPSE LPTKEYHVFH DHSDEVWQIS YSHNGRYLAS ASKDKTAIIF
DVVNLKRVFR LIGHIDTVAY IRWSPDDRYL LSCSCDKSVI LWDAFTGEKL RDYKHGFSVS
CCCWLPDGLS FITGSPDCHI THWSLNGEIL YKWEDVNIYD MALTSDGTKL YIVGFEQLIN
AEDKHIAIYS VETRECIKKI SLQSKVTSIC LSKDSKYALT NLEPHTTFLW DLEENRIVRQ
YMGHKLGNFL IGSCFGGKDD TFVLSGSEDD KIRIWHRESG KLLATLSGHV KCVNYVAYNP
VDPYQFASAG DDNTVRIWSN KDNPRRQ
