YIPF3_DANRE
ID YIPF3_DANRE Reviewed; 344 AA.
AC Q803Z2;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Protein YIPF3;
DE AltName: Full=YIP1 family member 3;
GN Name=yipf3; ORFNames=zgc:55279;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in the maintenance of the Golgi structure. May play
CC a role in hematopoiesis (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein. Golgi apparatus, cis-Golgi network membrane {ECO:0000250};
CC Multi-pass membrane protein. Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the YIP1 family. {ECO:0000305}.
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DR EMBL; BC044136; AAH44136.1; -; mRNA.
DR RefSeq; NP_956201.1; NM_199907.1.
DR AlphaFoldDB; Q803Z2; -.
DR STRING; 7955.ENSDARP00000025545; -.
DR PaxDb; Q803Z2; -.
DR Ensembl; ENSDART00000012759; ENSDARP00000025545; ENSDARG00000020449.
DR GeneID; 334511; -.
DR KEGG; dre:334511; -.
DR CTD; 25844; -.
DR ZFIN; ZDB-GENE-030131-6443; yipf3.
DR eggNOG; KOG3114; Eukaryota.
DR GeneTree; ENSGT00940000153766; -.
DR HOGENOM; CLU_068070_0_0_1; -.
DR InParanoid; Q803Z2; -.
DR OMA; HCIVLFV; -.
DR OrthoDB; 1332379at2759; -.
DR PhylomeDB; Q803Z2; -.
DR TreeFam; TF314073; -.
DR PRO; PR:Q803Z2; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 13.
DR Bgee; ENSDARG00000020449; Expressed in zone of skin and 28 other tissues.
DR ExpressionAtlas; Q803Z2; baseline and differential.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR InterPro; IPR026637; YIPF3.
DR PANTHER; PTHR15627:SF14; PTHR15627:SF14; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Cytoplasm; Differentiation; Glycoprotein; Golgi apparatus;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..344
FT /note="Protein YIPF3"
FT /id="PRO_0000244450"
FT TOPO_DOM 1..146
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q9GZM5"
FT TRANSMEM 147..167
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 168..185
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 186..206
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 207..212
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 213..233
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 234..242
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 243..263
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 264..272
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 273..293
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 294..344
FT /note="Lumenal"
FT /evidence="ECO:0000250|UniProtKB:Q9GZM5"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 329
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 344 AA; 37858 MW; B583F0B4237D4922 CRC64;
MSASQGSKNT NAEPWGGFDD NIIQGTGSAV IDMENMDDTS GSSFEDVGEM HQRMREEEEV
TAEAAATEED NGEYGEFLGM KGLKGQLGRQ VADEVWQAGK RQASKAFNLY ANIDILRPYF
DVEPIQVRNR LVESLIPVRM INFPQKVAGE LYGPMMLVFT LVAILLHGMK TSGTVIREGT
LMGTAIGTGF GYWLGVSSFI YFLAYLCNAQ ITMLQMLSLL GYGLFGHCVV LFITYNVHFH
SLFYLLWMVI GGLSTLRMVA VLISRTVGQT PRLILCGSLA ALHMLFLLYL HFAYHKMVEG
ILDTLEGPNI PPIQRVARDV PVVASAVVNA TVKSIAAIVQ SQQL