YIPF4_DANRE
ID YIPF4_DANRE Reviewed; 237 AA.
AC Q6NYF1;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Protein YIPF4;
DE AltName: Full=YIP1 family member 4;
GN Name=yipf4; ORFNames=zgc:77069;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in the maintenance of the Golgi structure.
CC {ECO:0000250|UniProtKB:Q9BSR8}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus, cis-Golgi network membrane
CC {ECO:0000250|UniProtKB:Q9BSR8}; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the YIP1 family. {ECO:0000305}.
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DR EMBL; BC066619; AAH66619.1; -; mRNA.
DR RefSeq; NP_998056.1; NM_212891.1.
DR AlphaFoldDB; Q6NYF1; -.
DR STRING; 7955.ENSDARP00000045098; -.
DR PaxDb; Q6NYF1; -.
DR Ensembl; ENSDART00000045099; ENSDARP00000045098; ENSDARG00000030957.
DR Ensembl; ENSDART00000187383; ENSDARP00000150916; ENSDARG00000109994.
DR GeneID; 405827; -.
DR KEGG; dre:405827; -.
DR CTD; 84272; -.
DR ZFIN; ZDB-GENE-040426-2253; yipf4.
DR eggNOG; KOG3103; Eukaryota.
DR GeneTree; ENSGT00940000153168; -.
DR HOGENOM; CLU_072083_0_0_1; -.
DR InParanoid; Q6NYF1; -.
DR OMA; TMWFCGG; -.
DR OrthoDB; 1242956at2759; -.
DR PhylomeDB; Q6NYF1; -.
DR TreeFam; TF315055; -.
DR PRO; PR:Q6NYF1; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 17.
DR Bgee; ENSDARG00000030957; Expressed in swim bladder and 27 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005802; C:trans-Golgi network; IBA:GO_Central.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IBA:GO_Central.
DR GO; GO:0048280; P:vesicle fusion with Golgi apparatus; IBA:GO_Central.
DR InterPro; IPR045231; Yip1/4-like.
DR InterPro; IPR006977; Yip1_dom.
DR PANTHER; PTHR21236; PTHR21236; 1.
DR Pfam; PF04893; Yip1; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..237
FT /note="Protein YIPF4"
FT /id="PRO_0000242636"
FT TOPO_DOM 1..106
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q9BSR8"
FT TRANSMEM 107..127
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 128..131
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 132..152
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 153..160
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 161..181
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 182..188
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 189..209
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 210..216
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 217..237
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 237 AA; 26630 MW; F6ACE50100AFD01A CRC64;
MQFSPTNGDF TFVSSTDAEE LSGTIDAPDI TLNMGPESNR DTYATTFLRQ RGYGWLLEVE
EEESEDTKPL LEELDIDLKD IYYKIRCVLM PMPSLGFNRQ VVRDNPDFWG PLAVVLLFSM
ISIYGQFRVV SWIITIWIFG SLTIFLLARV LGGEVSYGQV LGVIGYSLLP LIVIAPLLLV
IGGFEVVSTL IKLFGVFWAA YSAASLLVGD EFKTKKPLLI YPIFLLYIYF LSLYTGV