YIPF6_DANRE
ID YIPF6_DANRE Reviewed; 240 AA.
AC Q6IQ85;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Protein YIPF6;
DE AltName: Full=YIP1 family member 6;
GN Name=yipf6; ORFNames=zgc:86904;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000250|UniProtKB:Q96EC8}; Multi-pass membrane protein
CC {ECO:0000250|UniProtKB:Q96EC8}. Note=Evenly distributed between
CC cis- and trans-Golgi apparatus. Mainly localizes within medial-/trans-
CC Golgi and trans-Golgi network (TGN), while less so within cis-Golgi.
CC {ECO:0000250|UniProtKB:Q96EC8}.
CC -!- SIMILARITY: Belongs to the YIP1 family. {ECO:0000305}.
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DR EMBL; BC071525; AAH71525.1; -; mRNA.
DR RefSeq; NP_001002096.1; NM_001002096.1.
DR AlphaFoldDB; Q6IQ85; -.
DR STRING; 7955.ENSDARP00000071098; -.
DR PaxDb; Q6IQ85; -.
DR Ensembl; ENSDART00000076627; ENSDARP00000071098; ENSDARG00000054433.
DR GeneID; 415186; -.
DR KEGG; dre:415186; -.
DR CTD; 286451; -.
DR ZFIN; ZDB-GENE-040625-76; yipf6.
DR eggNOG; KOG2946; Eukaryota.
DR GeneTree; ENSGT00940000153168; -.
DR InParanoid; Q6IQ85; -.
DR OrthoDB; 1287193at2759; -.
DR PhylomeDB; Q6IQ85; -.
DR TreeFam; TF314563; -.
DR Reactome; R-DRE-432722; Golgi Associated Vesicle Biogenesis.
DR PRO; PR:Q6IQ85; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 5.
DR Bgee; ENSDARG00000054433; Expressed in testis and 28 other tissues.
DR ExpressionAtlas; Q6IQ85; baseline and differential.
DR GO; GO:0005797; C:Golgi medial cisterna; ISS:UniProtKB.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000138; C:Golgi trans cisterna; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005802; C:trans-Golgi network; ISS:UniProtKB.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR InterPro; IPR045231; Yip1/4-like.
DR InterPro; IPR006977; Yip1_dom.
DR PANTHER; PTHR21236; PTHR21236; 1.
DR Pfam; PF04893; Yip1; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..240
FT /note="Protein YIPF6"
FT /id="PRO_0000242671"
FT TOPO_DOM 1..91
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q96EC8"
FT TRANSMEM 92..112
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 113..125
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 126..146
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 147..149
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 150..170
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 171..172
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 173..193
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 194..215
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 216..236
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 237..240
FT /note="Lumenal"
FT /evidence="ECO:0000250|UniProtKB:Q96EC8"
SQ SEQUENCE 240 AA; 26320 MW; F11DDC42BD7D1158 CRC64;
MVVSHLNRTV TSLNELFEHH AHFAGLSDIS ISEDIPVEGD ISVPVGSQNA DNDFSTLDEP
VKDTILRDLR AVGQKFVHVM YPKKSSALLR DWDLWGPLLL CVTLALMLQG GSADSEEDGR
PQFAEVFVII WFGSVIITLN SKLLGGTISF FQSLCVLGYC ILPLTVAMIV CRIVLLGGSG
VVSFAVRLIV VTASFSWSTF ASTAFLADSQ PTNRKALVVY PVFLFYFVIG WMILTFSPSH