YIPF6_XENTR
ID YIPF6_XENTR Reviewed; 233 AA.
AC Q28CH8; Q05B29;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=Protein YIPF6;
DE AltName: Full=YIP1 family member 6;
GN Name=yipf6; ORFNames=TGas105o14.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Gastrula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000250|UniProtKB:Q96EC8}; Multi-pass membrane protein
CC {ECO:0000250|UniProtKB:Q96EC8}. Note=Evenly distributed between
CC cis- and trans-Golgi apparatus. Mainly localizes within medial-/trans-
CC Golgi and trans-Golgi network (TGN), while less so within cis-Golgi.
CC {ECO:0000250|UniProtKB:Q96EC8}.
CC -!- SIMILARITY: Belongs to the YIP1 family. {ECO:0000305}.
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DR EMBL; CR926375; CAJ83903.1; -; mRNA.
DR EMBL; BC122940; AAI22941.1; -; mRNA.
DR RefSeq; NP_001015932.1; NM_001015932.3.
DR AlphaFoldDB; Q28CH8; -.
DR PaxDb; Q28CH8; -.
DR DNASU; 548686; -.
DR GeneID; 548686; -.
DR KEGG; xtr:548686; -.
DR CTD; 286451; -.
DR Xenbase; XB-GENE-1009736; yipf6.
DR eggNOG; KOG2946; Eukaryota.
DR HOGENOM; CLU_059592_3_0_1; -.
DR InParanoid; Q28CH8; -.
DR PhylomeDB; Q28CH8; -.
DR Proteomes; UP000008143; Chromosome 8.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000005093; Expressed in liver and 14 other tissues.
DR ExpressionAtlas; Q28CH8; baseline.
DR GO; GO:0005797; C:Golgi medial cisterna; ISS:UniProtKB.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000138; C:Golgi trans cisterna; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005802; C:trans-Golgi network; ISS:UniProtKB.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR InterPro; IPR045231; Yip1/4-like.
DR InterPro; IPR006977; Yip1_dom.
DR PANTHER; PTHR21236; PTHR21236; 1.
DR Pfam; PF04893; Yip1; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..233
FT /note="Protein YIPF6"
FT /id="PRO_0000242672"
FT TOPO_DOM 1..84
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q96EC8"
FT TRANSMEM 85..105
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 106..111
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 112..132
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 133..142
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 143..163
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 164..180
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 181..201
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 202..208
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 209..229
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 230..233
FT /note="Lumenal"
FT /evidence="ECO:0000250|UniProtKB:Q96EC8"
SQ SEQUENCE 233 AA; 25422 MW; C0ABDDC659A901BB CRC64;
MAETEGFGDS GSKQLFAGLS NVSISGDIPV EGEITVPMAS TSQEDDLSTL DEPVKDTIMR
DLKAVGNKFL HVMYPKKSTT LLRDWDLWGP LVLCVSLALM LQGGNADSKD DGGPQFAEVF
VIIWFGAVVI TLNSKLLGGT ISFFQSLCVL GYCILPLTVA MLVCRLVLLL SHTTASFIVR
LVVVTVMFAW STFASTAFLA DSQPPNRRAL AVYPIFLFYF VISWMVLTFN TVS
