YIPL1_ARATH
ID YIPL1_ARATH Reviewed; 128 AA.
AC Q9SR97; Q1ECM9; Q9SS85;
DT 27-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 25-OCT-2005, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Protein yippee-like At3g08990;
GN OrderedLocusNames=At3g08990; ORFNames=MZB10.2, T16O11.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the yippee family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD56315.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAF07828.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC009326; AAD56315.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC010871; AAF07828.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE74705.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74706.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM65769.1; -; Genomic_DNA.
DR EMBL; BT025705; ABF82608.1; -; mRNA.
DR RefSeq; NP_001189843.1; NM_001202914.2.
DR RefSeq; NP_001327715.1; NM_001337793.1.
DR RefSeq; NP_187511.2; NM_111733.4.
DR AlphaFoldDB; Q9SR97; -.
DR SMR; Q9SR97; -.
DR STRING; 3702.AT3G08990.1; -.
DR PaxDb; Q9SR97; -.
DR PRIDE; Q9SR97; -.
DR ProteomicsDB; 242928; -.
DR EnsemblPlants; AT3G08990.1; AT3G08990.1; AT3G08990.
DR EnsemblPlants; AT3G08990.2; AT3G08990.2; AT3G08990.
DR EnsemblPlants; AT3G08990.3; AT3G08990.3; AT3G08990.
DR GeneID; 820051; -.
DR Gramene; AT3G08990.1; AT3G08990.1; AT3G08990.
DR Gramene; AT3G08990.2; AT3G08990.2; AT3G08990.
DR Gramene; AT3G08990.3; AT3G08990.3; AT3G08990.
DR KEGG; ath:AT3G08990; -.
DR Araport; AT3G08990; -.
DR TAIR; locus:2095269; AT3G08990.
DR eggNOG; KOG3399; Eukaryota.
DR HOGENOM; CLU_043857_1_1_1; -.
DR InParanoid; Q9SR97; -.
DR OMA; CYKEGHV; -.
DR OrthoDB; 1431042at2759; -.
DR PhylomeDB; Q9SR97; -.
DR PRO; PR:Q9SR97; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SR97; baseline and differential.
DR Genevisible; Q9SR97; AT.
DR GO; GO:0000151; C:ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR034751; Yippee.
DR InterPro; IPR004910; Yippee/Mis18/Cereblon.
DR InterPro; IPR039058; Yippee_fam.
DR PANTHER; PTHR13848; PTHR13848; 1.
DR Pfam; PF03226; Yippee-Mis18; 1.
DR PROSITE; PS51792; YIPPEE; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Reference proteome; Zinc.
FT CHAIN 1..128
FT /note="Protein yippee-like At3g08990"
FT /id="PRO_0000212402"
FT DOMAIN 12..109
FT /note="Yippee"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 16
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 19
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 72
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 75
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
SQ SEQUENCE 128 AA; 14607 MW; 2EC83394BAD0493A CRC64;
MGRLFVIDLE GLVYSCKYCQ THFAVTNDII SKSFHCKHGR AYLFDNVVNV TVGEKEHRVM
ITGWHTVADI FCVSCGSLVG WKYEIAYDKS QKYKEGKFIL ERFKVLGPYG GGYDMNQNEP
MTGSDDEE
