YIPL6_ARATH
ID YIPL6_ARATH Reviewed; 106 AA.
AC Q9T096; Q2V3E1;
DT 27-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 2.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Protein yippee-like At4g27745;
GN OrderedLocusNames=At4g27745; ORFNames=T29A15.230;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the yippee family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB38286.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g27740 has been split into 2 genes: At4g27740 and At4g27745.; Evidence={ECO:0000305};
CC Sequence=CAB81424.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g27740 has been split into 2 genes: At4g27740 and At4g27745.; Evidence={ECO:0000305};
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DR EMBL; AL035602; CAB38286.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161571; CAB81424.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE85388.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66414.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66415.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66416.1; -; Genomic_DNA.
DR PIR; T05879; T05879.
DR RefSeq; NP_001031733.1; NM_001036656.5.
DR RefSeq; NP_001328310.1; NM_001341881.1.
DR RefSeq; NP_001328311.1; NM_001341879.1.
DR RefSeq; NP_001328312.1; NM_001341880.1.
DR AlphaFoldDB; Q9T096; -.
DR SMR; Q9T096; -.
DR STRING; 3702.AT4G27745.1; -.
DR PaxDb; Q9T096; -.
DR PRIDE; Q9T096; -.
DR ProteomicsDB; 242918; -.
DR EnsemblPlants; AT4G27745.1; AT4G27745.1; AT4G27745.
DR EnsemblPlants; AT4G27745.2; AT4G27745.2; AT4G27745.
DR EnsemblPlants; AT4G27745.3; AT4G27745.3; AT4G27745.
DR EnsemblPlants; AT4G27745.4; AT4G27745.4; AT4G27745.
DR GeneID; 3770406; -.
DR Gramene; AT4G27745.1; AT4G27745.1; AT4G27745.
DR Gramene; AT4G27745.2; AT4G27745.2; AT4G27745.
DR Gramene; AT4G27745.3; AT4G27745.3; AT4G27745.
DR Gramene; AT4G27745.4; AT4G27745.4; AT4G27745.
DR KEGG; ath:AT4G27745; -.
DR Araport; AT4G27745; -.
DR TAIR; locus:1009023354; AT4G27745.
DR eggNOG; KOG3399; Eukaryota.
DR HOGENOM; CLU_043857_5_2_1; -.
DR InParanoid; Q9T096; -.
DR OMA; HLAFKGH; -.
DR OrthoDB; 1431042at2759; -.
DR PhylomeDB; Q9T096; -.
DR PRO; PR:Q9T096; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9T096; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR034751; Yippee.
DR InterPro; IPR004910; Yippee/Mis18/Cereblon.
DR InterPro; IPR039058; Yippee_fam.
DR PANTHER; PTHR13848; PTHR13848; 1.
DR Pfam; PF03226; Yippee-Mis18; 1.
DR PROSITE; PS51792; YIPPEE; 1.
PE 3: Inferred from homology;
KW Metal-binding; Reference proteome; Zinc.
FT CHAIN 1..106
FT /note="Protein yippee-like At4g27745"
FT /id="PRO_0000212405"
FT DOMAIN 8..105
FT /note="Yippee"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 12
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 15
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 68
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 71
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
SQ SEQUENCE 106 AA; 12081 MW; AE02E5F6F784281E CRC64;
MAQAIGPRLY SCCNCRNHVG LHDDIISKAF QGRTGRAFLF SHAMNIVVGP KEDRNLLTGL
HTVADISCVD CNEPLGWKYE RAYETSQKYK EGKFIFEKAK IVKEDW
