YIPL7_ARATH
ID YIPL7_ARATH Reviewed; 129 AA.
AC Q9FN32;
DT 27-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Protein yippee-like At5g53940;
GN OrderedLocusNames=At5g53940; ORFNames=K19P17.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the yippee family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB007644; BAB10724.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96431.1; -; Genomic_DNA.
DR EMBL; AY086122; AAM63328.1; -; mRNA.
DR RefSeq; NP_200205.1; NM_124773.3.
DR AlphaFoldDB; Q9FN32; -.
DR SMR; Q9FN32; -.
DR STRING; 3702.AT5G53940.1; -.
DR PaxDb; Q9FN32; -.
DR PRIDE; Q9FN32; -.
DR ProteomicsDB; 242343; -.
DR EnsemblPlants; AT5G53940.1; AT5G53940.1; AT5G53940.
DR GeneID; 835477; -.
DR Gramene; AT5G53940.1; AT5G53940.1; AT5G53940.
DR KEGG; ath:AT5G53940; -.
DR Araport; AT5G53940; -.
DR TAIR; locus:2154674; AT5G53940.
DR eggNOG; KOG3399; Eukaryota.
DR HOGENOM; CLU_043857_1_1_1; -.
DR InParanoid; Q9FN32; -.
DR OMA; CCCGQII; -.
DR OrthoDB; 1431042at2759; -.
DR PhylomeDB; Q9FN32; -.
DR PRO; PR:Q9FN32; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FN32; baseline and differential.
DR Genevisible; Q9FN32; AT.
DR GO; GO:0000151; C:ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR034751; Yippee.
DR InterPro; IPR004910; Yippee/Mis18/Cereblon.
DR InterPro; IPR039058; Yippee_fam.
DR PANTHER; PTHR13848; PTHR13848; 1.
DR Pfam; PF03226; Yippee-Mis18; 1.
DR PROSITE; PS51792; YIPPEE; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Reference proteome; Zinc.
FT CHAIN 1..129
FT /note="Protein yippee-like At5g53940"
FT /id="PRO_0000212406"
FT DOMAIN 12..109
FT /note="Yippee"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 16
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 19
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 72
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
FT BINDING 75
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01128"
SQ SEQUENCE 129 AA; 14808 MW; 837A8DC77720A3FE CRC64;
MGRIFTVELE GRSYRCRFCR THLALPDDLV SRSFHCRRGK AYLFNRSVNI SMGPLEERLM
LSGMHTVADI FCCCCGQNVG WKYESAHEKA QKYKEGKFVL ERGRIVDEID LSTEVYIDTH
GSTSDTEDS