YIQ4_SCHPO
ID YIQ4_SCHPO Reviewed; 341 AA.
AC Q9UT39;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 125.
DE RecName: Full=Uncharacterized WD repeat-containing protein C824.04;
GN ORFNames=SPAC824.04;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus
CC {ECO:0000269|PubMed:16823372}.
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DR EMBL; CU329670; CAB57334.1; -; Genomic_DNA.
DR PIR; T39105; T39105.
DR RefSeq; NP_593443.1; NM_001018876.2.
DR AlphaFoldDB; Q9UT39; -.
DR SMR; Q9UT39; -.
DR BioGRID; 279291; 102.
DR STRING; 4896.SPAC824.04.1; -.
DR MaxQB; Q9UT39; -.
DR PaxDb; Q9UT39; -.
DR EnsemblFungi; SPAC824.04.1; SPAC824.04.1:pep; SPAC824.04.
DR GeneID; 2542845; -.
DR KEGG; spo:SPAC824.04; -.
DR PomBase; SPAC824.04; -.
DR VEuPathDB; FungiDB:SPAC824.04; -.
DR eggNOG; KOG1446; Eukaryota.
DR HOGENOM; CLU_044117_3_0_1; -.
DR InParanoid; Q9UT39; -.
DR OMA; MAFRDYN; -.
DR PhylomeDB; Q9UT39; -.
DR PRO; PR:Q9UT39; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0000785; C:chromatin; IDA:PomBase.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:1990567; C:DPS complex; IDA:PomBase.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0048188; C:Set1C/COMPASS complex; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR GO; GO:0080182; P:histone H3-K4 trimethylation; IBA:GO_Central.
DR GO; GO:0006379; P:mRNA cleavage; IC:PomBase.
DR GO; GO:0006378; P:mRNA polyadenylation; IC:PomBase.
DR GO; GO:1902801; P:regulation of siRNA-independent facultative heterochromatin assembly; IMP:PomBase.
DR GO; GO:1904594; P:regulation of termination of RNA polymerase II transcription; IMP:PomBase.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR037867; Swd2/WDR82.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR19861; PTHR19861; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 3.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Cytoplasm; Nucleus; Reference proteome; Repeat; WD repeat.
FT CHAIN 1..341
FT /note="Uncharacterized WD repeat-containing protein
FT C824.04"
FT /id="PRO_0000316562"
FT REPEAT 19..59
FT /note="WD 1"
FT REPEAT 106..145
FT /note="WD 2"
FT REPEAT 252..293
FT /note="WD 3"
FT REPEAT 303..341
FT /note="WD 4"
SQ SEQUENCE 341 AA; 38466 MW; EB9B34A56FAFA2F5 CRC64;
MDIGILSSLK PAQSFRDNSL GSFINSIDYS DSGEYVATTC SADDTVQIYD ALDPKQVHTI
TCFETGIEVA RFTHHDHNLL LSTTKGNKDI QYVSIYDNKR ISYFSGHTDI VSSIEVSPIE
DQFVSTANDK TLKLWKMNQS SRCLGNLDLP SLGIPAYDPT GLVFAVACHS LSRIFLYDVR
NYGSDPFSTF TIDDSRYLSR FSFPPMMPEW KHMEFSNDGK CILLSTRANV HYILDAFSGD
VLSRLEDFQE LPFSNNFHGG STTFVPQGNF VIGSADDRTL NVWNLRHTFH HKGKTRPPEH
RIVSQSIINP GLVKYNPRYD QLLTAGSQLV FWLPEKYALT S
