ID   YJDF_ECOLI              Reviewed;         209 AA.
AC   P39270; Q2M6I3;
DT   01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-1995, sequence version 1.
DT   03-AUG-2022, entry version 127.
DE   RecName: Full=Inner membrane protein YjdF;
GN   Name=yjdF; OrderedLocusNames=b4121, JW4082;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=7610040; DOI=10.1093/nar/23.12.2105;
RA   Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.;
RT   "Analysis of the Escherichia coli genome VI: DNA sequence of the region
RT   from 92.8 through 100 minutes.";
RL   Nucleic Acids Res. 23:2105-2119(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [4]
RP   PRELIMINARY NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-57.
RC   STRAIN=K12;
RX   PubMed=2656658; DOI=10.1128/jb.171.6.3494-3503.1989;
RA   Bell P.J., Andrews S.C., Sivak M.N., Guest J.R.;
RT   "Nucleotide sequence of the FNR-regulated fumarase gene (fumB) of
RT   Escherichia coli K-12.";
RL   J. Bacteriol. 171:3494-3503(1989).
RN   [5]
RP   TOPOLOGY [LARGE SCALE ANALYSIS].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=15919996; DOI=10.1126/science.1109730;
RA   Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT   "Global topology analysis of the Escherichia coli inner membrane
RT   proteome.";
RL   Science 308:1321-1323(2005).
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR   EMBL; U14003; AAA97021.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC77082.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE78123.1; -; Genomic_DNA.
DR   EMBL; M27058; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   PIR; S56350; S56350.
DR   RefSeq; NP_418545.1; NC_000913.3.
DR   RefSeq; WP_000198773.1; NZ_SSZK01000018.1.
DR   AlphaFoldDB; P39270; -.
DR   BioGRID; 4262151; 10.
DR   STRING; 511145.b4121; -.
DR   PaxDb; P39270; -.
DR   PRIDE; P39270; -.
DR   EnsemblBacteria; AAC77082; AAC77082; b4121.
DR   EnsemblBacteria; BAE78123; BAE78123; BAE78123.
DR   GeneID; 948634; -.
DR   KEGG; ecj:JW4082; -.
DR   KEGG; eco:b4121; -.
DR   PATRIC; fig|1411691.4.peg.2579; -.
DR   EchoBASE; EB2356; -.
DR   eggNOG; COG3647; Bacteria.
DR   HOGENOM; CLU_087528_0_0_6; -.
DR   InParanoid; P39270; -.
DR   OMA; WDTQWDM; -.
DR   PhylomeDB; P39270; -.
DR   BioCyc; EcoCyc:G7825-MON; -.
DR   PRO; PR:P39270; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR   InterPro; IPR014509; UCP020606.
DR   Pfam; PF09997; DUF2238; 1.
DR   PIRSF; PIRSF020606; UCP020606; 1.
PE   1: Evidence at protein level;
KW   Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..209
FT                   /note="Inner membrane protein YjdF"
FT                   /id="PRO_0000169729"
FT   TOPO_DOM        1..7
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        8..28
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        29..31
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        32..52
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        53..55
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        56..76
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        77..131
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        132..152
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        153..177
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        178..198
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        199..209
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   209 AA;  23442 MW;  B5EEB5B779146DD5 CRC64;
     MTRTLKPLIL NTSALTLTLI LIYTGISAHD KLTWLMEVTP VIIVVQLLLA TARRYPLTPL
     LYTLIFLHAI ILMVGGQYTY AKVPVGFEVQ EWLGLSRNPY DKLGHFFQGL VPALVAREIL
     VRGMYVRGRK MVAFLVCCVA LAISAMYELI EWWAALAMGQ GADDFLGTQG DQWDTQSDMF
     CALLGALTTV IFLARFHCRQ LRRFGLITG