YJGH_ECOLI
ID YJGH_ECOLI Reviewed; 131 AA.
AC P39332; Q2M660;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 147.
DE RecName: Full=RutC family protein YjgH;
GN Name=yjgH; OrderedLocusNames=b4248, JW4206;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=7610040; DOI=10.1093/nar/23.12.2105;
RA Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.;
RT "Analysis of the Escherichia coli genome VI: DNA sequence of the region
RT from 92.8 through 100 minutes.";
RL Nucleic Acids Res. 23:2105-2119(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF 1-131.
RG Midwest center for structural genomics (MCSG);
RT "The 2.5A crystal structure of protein yjgH from E. coli.";
RL Submitted (JAN-2005) to the PDB data bank.
CC -!- INTERACTION:
CC P39332; P0A9M8: pta; NbExp=2; IntAct=EBI-561380, EBI-555015;
CC -!- SIMILARITY: Belongs to the RutC family. {ECO:0000305}.
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DR EMBL; U14003; AAA97145.1; -; Genomic_DNA.
DR EMBL; U00096; AAC77205.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE78246.1; -; Genomic_DNA.
DR PIR; S56474; S56474.
DR RefSeq; NP_418669.1; NC_000913.3.
DR RefSeq; WP_000230281.1; NZ_STEB01000013.1.
DR PDB; 1PF5; X-ray; 2.50 A; A=1-131.
DR PDBsum; 1PF5; -.
DR AlphaFoldDB; P39332; -.
DR SMR; P39332; -.
DR BioGRID; 4262944; 22.
DR DIP; DIP-12603N; -.
DR IntAct; P39332; 1.
DR STRING; 511145.b4248; -.
DR jPOST; P39332; -.
DR PaxDb; P39332; -.
DR PRIDE; P39332; -.
DR EnsemblBacteria; AAC77205; AAC77205; b4248.
DR EnsemblBacteria; BAE78246; BAE78246; BAE78246.
DR GeneID; 66671834; -.
DR GeneID; 948769; -.
DR KEGG; ecj:JW4206; -.
DR KEGG; eco:b4248; -.
DR PATRIC; fig|511145.12.peg.4379; -.
DR EchoBASE; EB2417; -.
DR eggNOG; COG0251; Bacteria.
DR HOGENOM; CLU_100715_4_1_6; -.
DR InParanoid; P39332; -.
DR OMA; RHALYEE; -.
DR PhylomeDB; P39332; -.
DR BioCyc; EcoCyc:G7879-MON; -.
DR EvolutionaryTrace; P39332; -.
DR PRO; PR:P39332; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR CDD; cd02198; YjgH_like; 1.
DR Gene3D; 3.30.1330.40; -; 1.
DR InterPro; IPR035959; RutC-like_sf.
DR InterPro; IPR006175; YjgF/YER057c/UK114.
DR InterPro; IPR038743; YjgH-like.
DR PANTHER; PTHR11803; PTHR11803; 1.
DR Pfam; PF01042; Ribonuc_L-PSP; 1.
DR SUPFAM; SSF55298; SSF55298; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..131
FT /note="RutC family protein YjgH"
FT /id="PRO_0000170325"
FT STRAND 5..7
FT /evidence="ECO:0007829|PDB:1PF5"
FT TURN 14..20
FT /evidence="ECO:0007829|PDB:1PF5"
FT STRAND 23..27
FT /evidence="ECO:0007829|PDB:1PF5"
FT STRAND 30..36
FT /evidence="ECO:0007829|PDB:1PF5"
FT HELIX 49..65
FT /evidence="ECO:0007829|PDB:1PF5"
FT TURN 66..68
FT /evidence="ECO:0007829|PDB:1PF5"
FT HELIX 71..73
FT /evidence="ECO:0007829|PDB:1PF5"
FT STRAND 74..83
FT /evidence="ECO:0007829|PDB:1PF5"
FT HELIX 84..86
FT /evidence="ECO:0007829|PDB:1PF5"
FT HELIX 88..98
FT /evidence="ECO:0007829|PDB:1PF5"
FT STRAND 101..103
FT /evidence="ECO:0007829|PDB:1PF5"
FT STRAND 108..111
FT /evidence="ECO:0007829|PDB:1PF5"
FT STRAND 119..127
FT /evidence="ECO:0007829|PDB:1PF5"
SQ SEQUENCE 131 AA; 14590 MW; 343A68BFAE3D0849 CRC64;
MVERTAVFPA GRHSLYAEHR YSAAIRSGDL LFVSGQVGSR EDGTPEPDFQ QQVRLAFDNL
HATLAAAGCT FDDIIDVTSF HTDPENQFED IMTVKNEIFS APPYPNWTAV GVTWLAGFDF
EIKVIARIPE Q