ID   YJU2B_RAT               Reviewed;         385 AA.
AC   Q32PZ9;
DT   06-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   06-DEC-2005, sequence version 1.
DT   03-AUG-2022, entry version 81.
DE   RecName: Full=Probable splicing factor YJU2B {ECO:0000305};
DE   AltName: Full=Coiled-coil domain-containing protein 130 {ECO:0000312|RGD:1307598};
GN   Name=Yju2b {ECO:0000312|RGD:1307598};
GN   Synonyms=Ccdc130 {ECO:0000312|RGD:1307598};
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Placenta;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
CC   -!- FUNCTION: May be involved in mRNA splicing.
CC       {ECO:0000250|UniProtKB:Q9BW85}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9BW85}.
CC   -!- SIMILARITY: Belongs to the CWC16 family. {ECO:0000305}.
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DR   EMBL; BC107912; AAI07913.1; -; mRNA.
DR   RefSeq; NP_001032733.1; NM_001037644.1.
DR   RefSeq; XP_006255314.1; XM_006255252.3.
DR   RefSeq; XP_017456743.1; XM_017601254.1.
DR   AlphaFoldDB; Q32PZ9; -.
DR   SMR; Q32PZ9; -.
DR   BioGRID; 257942; 1.
DR   STRING; 10116.ENSRNOP00000011150; -.
DR   PaxDb; Q32PZ9; -.
DR   PRIDE; Q32PZ9; -.
DR   Ensembl; ENSRNOT00000011150; ENSRNOP00000011150; ENSRNOG00000008319.
DR   Ensembl; ENSRNOT00000114282; ENSRNOP00000092066; ENSRNOG00000008319.
DR   GeneID; 304656; -.
DR   KEGG; rno:304656; -.
DR   CTD; 81576; -.
DR   RGD; 1307598; Yju2b.
DR   eggNOG; KOG2990; Eukaryota.
DR   GeneTree; ENSGT00530000063615; -.
DR   HOGENOM; CLU_050402_3_1_1; -.
DR   InParanoid; Q32PZ9; -.
DR   OMA; HETIIGQ; -.
DR   OrthoDB; 1583452at2759; -.
DR   PhylomeDB; Q32PZ9; -.
DR   TreeFam; TF313671; -.
DR   PRO; PR:Q32PZ9; -.
DR   Proteomes; UP000002494; Chromosome 19.
DR   Bgee; ENSRNOG00000008319; Expressed in testis and 20 other tissues.
DR   Genevisible; Q32PZ9; RN.
DR   GO; GO:0071014; C:post-mRNA release spliceosomal complex; IBA:GO_Central.
DR   GO; GO:0005684; C:U2-type spliceosomal complex; IBA:GO_Central.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   GO; GO:0009615; P:response to virus; ISO:RGD.
DR   GO; GO:0008380; P:RNA splicing; IBA:GO_Central.
DR   InterPro; IPR007590; Saf4/Yju2.
DR   PANTHER; PTHR12111; PTHR12111; 1.
DR   Pfam; PF04502; Saf4_Yju2; 1.
PE   2: Evidence at transcript level;
KW   Coiled coil; Nucleus; Phosphoprotein; Reference proteome.
FT   CHAIN           1..385
FT                   /note="Probable splicing factor YJU2B"
FT                   /id="PRO_0000280047"
FT   REGION          1..26
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          256..385
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          182..215
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        257..272
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        326..341
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        348..385
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         40
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P13994"
FT   MOD_RES         306
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P13994"
SQ   SEQUENCE   385 AA;  43800 MW;  92043474FAAC74CB CRC64;
     MGERKGQNKY YPPDFNPEKH GSLNRYHNSH PLRERARKLS QGILIIRFEM PYNIWCDGCK
     NHIGMGVRYN AEKKKVGNYY TTPIYRFRMK CHLCVNYIEM QTDPANCDYV IVSGASRKEE
     RWDMEDNEQV LTTEHEKKEK LETDAMFRLE HGEADRSTLK KALPTLSHIQ EAQNAWKDDF
     ALNSMLRRHF REKKKAMQEE EEKDQALQAK ANLAIPLVPE SEDDRRLAAL LRLHTLDSYE
     DKQRMKRTEI IHRSWFPSAQ GPSTSSSKAS TVLKKLCRGR RPPTGSAGAP GDLGIVRRKS
     REAPESPQCT ADNSLSEEPR GPPGTTPDSK TLQGTAEAPR TSKTLESKRN CSDQALPLGS
     SQEDLLHPNT PNASLVADYS DSESE