YKCG_SCHPO
ID YKCG_SCHPO Reviewed; 422 AA.
AC Q9P6P7;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=Uncharacterized RNA-binding protein C644.16;
GN ORFNames=SPAC644.16;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16823372}.
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DR EMBL; CU329670; CAB90143.1; -; Genomic_DNA.
DR RefSeq; NP_593884.1; NM_001019314.2.
DR AlphaFoldDB; Q9P6P7; -.
DR SMR; Q9P6P7; -.
DR BioGRID; 279882; 8.
DR STRING; 4896.SPAC644.16.1; -.
DR iPTMnet; Q9P6P7; -.
DR MaxQB; Q9P6P7; -.
DR PaxDb; Q9P6P7; -.
DR PRIDE; Q9P6P7; -.
DR EnsemblFungi; SPAC644.16.1; SPAC644.16.1:pep; SPAC644.16.
DR GeneID; 2543462; -.
DR KEGG; spo:SPAC644.16; -.
DR PomBase; SPAC644.16; -.
DR VEuPathDB; FungiDB:SPAC644.16; -.
DR eggNOG; KOG0108; Eukaryota.
DR HOGENOM; CLU_028601_0_0_1; -.
DR InParanoid; Q9P6P7; -.
DR OMA; PSCVVYV; -.
DR PhylomeDB; Q9P6P7; -.
DR PRO; PR:Q9P6P7; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0033620; C:Mei2 nuclear dot complex; IDA:PomBase.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IBA:GO_Central.
DR GO; GO:0005849; C:mRNA cleavage factor complex; ISO:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; ISO:PomBase.
DR GO; GO:0007129; P:homologous chromosome pairing at meiosis; EXP:PomBase.
DR GO; GO:0006379; P:mRNA cleavage; ISO:PomBase.
DR GO; GO:0006378; P:mRNA polyadenylation; ISO:PomBase.
DR GO; GO:0033621; P:nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts; IMP:PomBase.
DR GO; GO:0098789; P:pre-mRNA cleavage required for polyadenylation; IBA:GO_Central.
DR Gene3D; 1.10.20.70; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR025742; CSTF2_hinge.
DR InterPro; IPR026896; CSTF_C.
DR InterPro; IPR038192; CSTF_C_sf.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF14327; CSTF2_hinge; 1.
DR Pfam; PF14304; CSTF_C; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Nucleus; Reference proteome; RNA-binding.
FT CHAIN 1..422
FT /note="Uncharacterized RNA-binding protein C644.16"
FT /id="PRO_0000310814"
FT DOMAIN 5..83
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 337..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 422 AA; 45010 MW; 5BD0E3FB825D2AC1 CRC64;
MNPSCVVYVG NIPYEMAEEQ VIDIFKQSGP VKSFQLVIDP ESGQPKGYGF CEYHDPATAA
SAVRNLNNYD AGTRRLRVDF PTADQIRRLD KLLGPSRYGY YPQSYANQSY TYGNNFGSYP
PTQPSTQPLP QSYGYPSYPP AGYRGGSARP SGVLANDEVY RVLAQLAPNE IDYMLSAIKA
LCLEAPEQAA QLFETNPQLS YAVFQAMLMK RYTSESVVAD LLIPAGVNLP GAQEPNRGYF
SPMHTYSSAV PGPISVPSAP YGRASSTIAE VSPMYGSHAA PYASTPSAAV GSSRGSTPAS
ATVPISPARG FPTTSAYNPA PPAYGMANPA YGSTGIRSSS IPSSGSIRSP SLTTTSAQAT
TNATNNITTT TAAQDENATK AALIAQLMAL TDDQINVLPP DQKERILQIR QALPSSYKTE
SK