YKJ2_CAEEL
ID YKJ2_CAEEL Reviewed; 323 AA.
AC P34276; Q2L6Y8;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1994, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=GILT-like protein C02D5.2;
GN ORFNames=C02D5.2;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7906398; DOI=10.1038/368032a0;
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans.";
RL Nature 368:32-38(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING.
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a;
CC IsoId=P34276-1; Sequence=Displayed;
CC Name=b;
CC IsoId=P34276-2; Sequence=VSP_020781;
CC -!- SIMILARITY: Belongs to the GILT family. {ECO:0000305}.
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DR EMBL; FO080279; CCD62558.1; -; Genomic_DNA.
DR EMBL; FO080279; CCD62559.1; -; Genomic_DNA.
DR PIR; S44744; S44744.
DR RefSeq; NP_001040839.1; NM_001047374.2. [P34276-1]
DR RefSeq; NP_001040840.1; NM_001047375.1. [P34276-2]
DR AlphaFoldDB; P34276; -.
DR SMR; P34276; -.
DR EPD; P34276; -.
DR PaxDb; P34276; -.
DR PeptideAtlas; P34276; -.
DR EnsemblMetazoa; C02D5.2a.1; C02D5.2a.1; WBGene00015336. [P34276-1]
DR EnsemblMetazoa; C02D5.2b.1; C02D5.2b.1; WBGene00015336. [P34276-2]
DR GeneID; 176203; -.
DR KEGG; cel:CELE_C02D5.2; -.
DR UCSC; C02D5.2a; c. elegans. [P34276-1]
DR CTD; 176203; -.
DR WormBase; C02D5.2a; CE00034; WBGene00015336; -. [P34276-1]
DR WormBase; C02D5.2b; CE39554; WBGene00015336; -. [P34276-2]
DR eggNOG; KOG3160; Eukaryota.
DR GeneTree; ENSGT00390000010450; -.
DR HOGENOM; CLU_066886_2_0_1; -.
DR InParanoid; P34276; -.
DR OMA; DFIPWIV; -.
DR OrthoDB; 803513at2759; -.
DR PhylomeDB; P34276; -.
DR Reactome; R-CEL-2132295; MHC class II antigen presentation.
DR PRO; PR:P34276; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00015336; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IBA:GO_Central.
DR GO; GO:0016671; F:oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; IEA:InterPro.
DR InterPro; IPR004911; Interferon-induced_GILT.
DR PANTHER; PTHR13234; PTHR13234; 1.
DR Pfam; PF03227; GILT; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Glycoprotein; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..323
FT /note="GILT-like protein C02D5.2"
FT /id="PRO_0000065106"
FT TRANSMEM 13..32
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 37..59
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 87..104
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CARBOHYD 35
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 289
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT VAR_SEQ 1..60
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_020781"
SQ SEQUENCE 323 AA; 36932 MW; DC5F79CEF32B01C8 CRC64;
MSKYLRTSHP SPLICRPILT FSSLHILTAF LISGNSSYIN WSVTIILLIL GLYACHRFLN
MKKLTRDAQE PLLPHIRPST RNKIRKYIYG TIFILSIFLL YRSLNSPDTS KHGIGRNGDF
IEYEPKAGPT IKEPVENIVK LDVYMEAQCP DTSRFFRQQL KKAWDILGRL NRIELNVIPF
GKARCTEKGN DFECQCQHGP TECQINQLMN CVIDRFGFPH RYLPGVLCMQ GKYSLDEAMK
CVTENYPSEY ERMRECASGT RGRRLLALSG QKTASLTPAI DFIPWIVING SRNSDALYDL
TQNVCEAMQP MPSACKDYLR SLQ