ID   YLS8_ARATH              Reviewed;         142 AA.
AC   Q9FE62; Q8LF46;
DT   11-DEC-2013, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 149.
DE   RecName: Full=Thioredoxin-like protein YLS8;
DE   AltName: Full=Protein YELLOW-LEAF-SPECIFIC GENE 8;
GN   Name=YLS8; OrderedLocusNames=At5g08290; ORFNames=F8L15.20;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RX   PubMed=11230571; DOI=10.1093/pcp/pce021;
RA   Yoshida S., Ito M., Nishida I., Watanabe A.;
RT   "Isolation and RNA gel blot analysis of genes that could serve as potential
RT   molecular markers for leaf senescence in Arabidopsis thaliana.";
RL   Plant Cell Physiol. 42:170-178(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA   Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA   Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA   O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA   Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA   Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA   Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA   Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA   Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA   Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA   Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA   Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL   Nature 408:823-826(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- INTERACTION:
CC       Q9FE62; Q84MB2: TIFY8; NbExp=3; IntAct=EBI-25520077, EBI-4426557;
CC   -!- TISSUE SPECIFICITY: Expressed in roots, leaves, stems, cauline leaves
CC       and flowers. {ECO:0000269|PubMed:11230571}.
CC   -!- DEVELOPMENTAL STAGE: Up-regulated in leaves during natural senescence.
CC       {ECO:0000269|PubMed:11230571}.
CC   -!- SIMILARITY: Belongs to the DIM1 family. {ECO:0000305}.
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DR   EMBL; AB047811; BAB32888.1; -; mRNA.
DR   EMBL; AL392174; CAC08329.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED91278.1; -; Genomic_DNA.
DR   EMBL; AF324685; AAG40036.1; -; mRNA.
DR   EMBL; AF326857; AAG41439.1; -; mRNA.
DR   EMBL; AF339680; AAK00362.1; -; mRNA.
DR   EMBL; AF375407; AAK52991.1; -; mRNA.
DR   EMBL; AY066051; AAL47418.1; -; mRNA.
DR   EMBL; AY085055; AAM61612.1; -; mRNA.
DR   RefSeq; NP_196446.1; NM_120912.3.
DR   AlphaFoldDB; Q9FE62; -.
DR   SMR; Q9FE62; -.
DR   BioGRID; 16003; 1.
DR   IntAct; Q9FE62; 1.
DR   STRING; 3702.AT5G08290.1; -.
DR   iPTMnet; Q9FE62; -.
DR   PaxDb; Q9FE62; -.
DR   PRIDE; Q9FE62; -.
DR   ProteomicsDB; 242841; -.
DR   EnsemblPlants; AT5G08290.1; AT5G08290.1; AT5G08290.
DR   GeneID; 830725; -.
DR   Gramene; AT5G08290.1; AT5G08290.1; AT5G08290.
DR   KEGG; ath:AT5G08290; -.
DR   Araport; AT5G08290; -.
DR   TAIR; locus:2150768; AT5G08290.
DR   eggNOG; KOG3414; Eukaryota.
DR   HOGENOM; CLU_117348_0_0_1; -.
DR   InParanoid; Q9FE62; -.
DR   OMA; DFNEMYE; -.
DR   OrthoDB; 1320693at2759; -.
DR   PhylomeDB; Q9FE62; -.
DR   PRO; PR:Q9FE62; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FE62; baseline and differential.
DR   Genevisible; Q9FE62; AT.
DR   GO; GO:0005737; C:cytoplasm; HDA:TAIR.
DR   GO; GO:0005634; C:nucleus; HDA:TAIR.
DR   GO; GO:0005681; C:spliceosomal complex; IBA:GO_Central.
DR   GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IBA:GO_Central.
DR   GO; GO:0005682; C:U5 snRNP; IBA:GO_Central.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   CDD; cd02954; DIM1; 1.
DR   InterPro; IPR004123; Dim1.
DR   InterPro; IPR036249; Thioredoxin-like_sf.
DR   PANTHER; PTHR12052; PTHR12052; 1.
DR   Pfam; PF02966; DIM1; 1.
DR   PIRSF; PIRSF017199; mRNA_splic_U5; 1.
DR   SMART; SM01410; DIM1; 1.
DR   SUPFAM; SSF52833; SSF52833; 1.
PE   1: Evidence at protein level;
KW   Reference proteome.
FT   CHAIN           1..142
FT                   /note="Thioredoxin-like protein YLS8"
FT                   /id="PRO_0000424705"
FT   CONFLICT        48
FT                   /note="V -> F (in Ref. 5; AAM61612)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   142 AA;  16591 MW;  9770F89B74771BDF CRC64;
     MSYLLPHLHS GWAVDQSILA EEERLVVIRF GHDWDETCMQ MDEVLASVAE TIKNFAVIYL
     VDITEVPDFN TMYELYDPST VMFFFRNKHI MIDLGTGNNN KINWALKDKQ EFIDIIETVY
     RGARKGRGLV IAPKDYSTKY RY