YMAB_BACSU
ID YMAB_BACSU Reviewed; 206 AA.
AC P50619;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Protein YmaB;
GN Name=ymaB; OrderedLocusNames=BSU17400;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], OPERON, AND DISRUPTION PHENOTYPE.
RC STRAIN=168;
RX PubMed=8969495; DOI=10.1099/13500872-142-11-2995;
RA Scotti C., Valbuzzi A., Perego M., Galizzi A., Albertini A.M.;
RT "The Bacillus subtilis genes for ribonucleotide reductase are similar to
RT the genes for the second class I NrdE/NrdF enzymes of Enterobacteriaceae.";
RL Microbiology 142:2995-3004(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 197-206.
RC STRAIN=168;
RX PubMed=8407798; DOI=10.1128/jb.175.19.6260-6268.1993;
RA Kuroda A., Asami Y., Sekiguchi J.;
RT "Molecular cloning of a sporulation-specific cell wall hydrolase gene of
RT Bacillus subtilis.";
RL J. Bacteriol. 175:6260-6268(1993).
CC -!- INDUCTION: Part of the probable nrdI(ymaA)-nrdE-nrdF-ymaB operon.
CC Expression is constitutive but low, dramatically induced by thymidine
CC starvation which requires recA. {ECO:0000269|PubMed:8969495}.
CC -!- DISRUPTION PHENOTYPE: Essential, at least the last 3 genes of the locus
CC cannot be deleted; could be due to polar effects on downstream ymaB.
CC {ECO:0000269|PubMed:8969495}.
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DR EMBL; Z68500; CAA92812.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB13624.1; -; Genomic_DNA.
DR EMBL; D14666; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; D69883; D69883.
DR RefSeq; NP_389622.1; NC_000964.3.
DR RefSeq; WP_003245105.1; NZ_JNCM01000035.1.
DR AlphaFoldDB; P50619; -.
DR SMR; P50619; -.
DR STRING; 224308.BSU17400; -.
DR PaxDb; P50619; -.
DR PRIDE; P50619; -.
DR EnsemblBacteria; CAB13624; CAB13624; BSU_17400.
DR GeneID; 939453; -.
DR KEGG; bsu:BSU17400; -.
DR PATRIC; fig|224308.179.peg.1886; -.
DR eggNOG; COG4112; Bacteria.
DR InParanoid; P50619; -.
DR OMA; FKQPIPY; -.
DR BioCyc; BSUB:BSU17400-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR InterPro; IPR015797; NUDIX_hydrolase-like_dom_sf.
DR SUPFAM; SSF55811; SSF55811; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..206
FT /note="Protein YmaB"
FT /id="PRO_0000049630"
SQ SEQUENCE 206 AA; 23388 MW; 10AC1843C97C1893 CRC64;
MGKMDEMILV APRDDVFKKE SLTFQGVYSE DSRVAEIMAQ IEAAYREMRR GDAEEDPRFK
QPIPYVVIKR EDEVFLYERL AGGGESRLHN KLSLGFGGHM NAIEGAASFA EVLKLNTDRE
LEEELQINEE DKQAIVTLGL INDDENSVGK VHIGILSALQ LKPGAQVEVK EKEQIAGKWM
KVSELKQDDI YNRLETWSQF VVDILE