YMDA_ECOLI
ID YMDA_ECOLI Reviewed; 103 AA.
AC P75917;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Uncharacterized protein YmdA;
DE Flags: Precursor;
GN Name=ymdA; OrderedLocusNames=b1044, JW1031;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP INDUCTION, AND OPERON STRUCTURE.
RC STRAIN=K12 / MC4100;
RX PubMed=17010156; DOI=10.1111/j.1365-2958.2006.05440.x;
RA Weber H., Pesavento C., Possling A., Tischendorf G., Hengge R.;
RT "Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia
RT coli.";
RL Mol. Microbiol. 62:1014-1034(2006).
CC -!- INDUCTION: Under control of the CsgD transcription factor, part of the
CC csgBAC/ymdA operon. {ECO:0000269|PubMed:17010156}.
CC -!- SIMILARITY: To the N-terminal of the FimA/PapA family of fimbria
CC proteins. {ECO:0000305}.
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DR EMBL; U00096; AAC74128.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35834.1; -; Genomic_DNA.
DR PIR; A64847; A64847.
DR RefSeq; NP_415562.1; NC_000913.3.
DR RefSeq; WP_000489587.1; NZ_SSZK01000058.1.
DR AlphaFoldDB; P75917; -.
DR STRING; 511145.b1044; -.
DR PaxDb; P75917; -.
DR PRIDE; P75917; -.
DR EnsemblBacteria; AAC74128; AAC74128; b1044.
DR EnsemblBacteria; BAA35834; BAA35834; BAA35834.
DR GeneID; 949012; -.
DR KEGG; ecj:JW1031; -.
DR KEGG; eco:b1044; -.
DR PATRIC; fig|511145.12.peg.1085; -.
DR EchoBASE; EB3632; -.
DR eggNOG; ENOG50308WD; Bacteria.
DR HOGENOM; CLU_155233_3_1_6; -.
DR OMA; PCEISAR; -.
DR PhylomeDB; P75917; -.
DR BioCyc; EcoCyc:G6549-MON; -.
DR PRO; PR:P75917; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0044010; P:single-species biofilm formation; IMP:EcoCyc.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..103
FT /note="Uncharacterized protein YmdA"
FT /id="PRO_0000013819"
SQ SEQUENCE 103 AA; 11194 MW; C3B399F51D0CA1B5 CRC64;
MFRPFLNSLM LGSLFFPFIA IAGSTVQGGV IHFYGQIVEP ACDVSTQSSP VEMNCPQNGS
IPGKTYSSKA LMSGNVKNAQ IASVKVQYLD KQKKLAVMNI EYN