YMDF_ECOLI
ID YMDF_ECOLI Reviewed; 57 AA.
AC P56614; Q9R302; Q9ZN60;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-1998, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Uncharacterized protein YmdF;
GN Name=ymdF; OrderedLocusNames=b4518, JW5136;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP IDENTIFICATION.
RA Rudd K.E.;
RL Unpublished observations (AUG-1998).
CC -!- SIMILARITY: Belongs to the con-10 family. {ECO:0000305}.
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DR EMBL; U00096; AAC74090.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA35772.2; -; Genomic_DNA.
DR PIR; C64842; C64842.
DR RefSeq; NP_415525.2; NC_000913.3.
DR RefSeq; WP_001273658.1; NZ_STEB01000006.1.
DR AlphaFoldDB; P56614; -.
DR BioGRID; 4259547; 11.
DR IntAct; P56614; 1.
DR STRING; 511145.b4518; -.
DR jPOST; P56614; -.
DR PaxDb; P56614; -.
DR PRIDE; P56614; -.
DR EnsemblBacteria; AAC74090; AAC74090; b4518.
DR EnsemblBacteria; BAA35772; BAA35772; BAA35772.
DR GeneID; 66670717; -.
DR GeneID; 945598; -.
DR KEGG; ecj:JW5136; -.
DR KEGG; eco:b4518; -.
DR PATRIC; fig|511145.12.peg.1041; -.
DR EchoBASE; EB4104; -.
DR eggNOG; COG3729; Bacteria.
DR HOGENOM; CLU_142865_5_1_6; -.
DR InParanoid; P56614; -.
DR OMA; RDQERTG; -.
DR PhylomeDB; P56614; -.
DR BioCyc; EcoCyc:MON0-2665; -.
DR PRO; PR:P56614; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR InterPro; IPR019626; Stress-induced_KGG_rpt.
DR Pfam; PF10685; KGG; 2.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..57
FT /note="Uncharacterized protein YmdF"
FT /id="PRO_0000168810"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..23
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 57 AA; 5883 MW; D18133DAE91C6F5B CRC64;
MANHRGGSGN FAEDRERASE AGKKGGQHSG GNFKNDPQRA SEAGKKGGKS SHGKSDN