YME2_CANAL
ID YME2_CANAL Reviewed; 867 AA.
AC Q5A061; A0A1D8PSM3; Q5A009; Q5A037; Q5A089;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2017, sequence version 2.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Mitochondrial escape protein 2;
DE Flags: Precursor;
GN Name=PRP13; Synonyms=PRP12, PRP121, PRP122, YME2;
GN OrderedLocusNames=CAALFM_CR03810WA;
GN ORFNames=CaO19.11829, CaO19.11857, CaO19.4351, CaO19.4379;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Plays a role in maintaining the mitochondrial genome and in
CC controlling the mtDNA escape. Involved in the regulation of mtDNA
CC nucleotide structure and number. May have a dispensable role in early
CC maturation of pre-rRNA (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Single-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the YME2 family. {ECO:0000305}.
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DR EMBL; CP017630; AOW31119.1; -; Genomic_DNA.
DR RefSeq; XP_715128.2; XM_710035.2.
DR AlphaFoldDB; Q5A061; -.
DR STRING; 237561.Q5A061; -.
DR GeneID; 3643194; -.
DR KEGG; cal:CAALFM_CR03810WA; -.
DR CGD; CAL0000185129; PRP13.
DR VEuPathDB; FungiDB:CR_03810W_A; -.
DR eggNOG; ENOG502QS0P; Eukaryota.
DR HOGENOM; CLU_007861_1_0_1; -.
DR InParanoid; Q5A061; -.
DR OrthoDB; 213553at2759; -.
DR PRO; PR:Q5A061; -.
DR Proteomes; UP000000559; Chromosome R.
DR GO; GO:0031305; C:integral component of mitochondrial inner membrane; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000002; P:mitochondrial genome maintenance; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12433; RRM_Yme2p_like; 1.
DR InterPro; IPR018850; Mt_escape_2_C.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039627; Yme2_C.
DR InterPro; IPR034260; Yme2_RRM.
DR PANTHER; PTHR32198; PTHR32198; 1.
DR Pfam; PF10443; RNA12; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
PE 3: Inferred from homology;
KW Coiled coil; Membrane; Mitochondrion; Mitochondrion inner membrane;
KW mRNA processing; Reference proteome; RNA-binding; Transit peptide;
KW Transmembrane; Transmembrane helix.
FT TRANSIT 1..25
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 26..867
FT /note="Mitochondrial escape protein 2"
FT /id="PRO_0000343116"
FT TOPO_DOM 26..279
FT /note="Mitochondrial matrix"
FT /evidence="ECO:0000255"
FT TRANSMEM 280..300
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 301..867
FT /note="Mitochondrial intermembrane"
FT /evidence="ECO:0000255"
FT DOMAIN 179..264
FT /note="RRM"
FT COILED 795..852
FT /evidence="ECO:0000255"
SQ SEQUENCE 867 AA; 99327 MW; 06E524685F470F4A CRC64;
MIIRTLRSQL RLPKPVYISP PCRYYSTDLE KLKKESDTTE SDNSASATGV IDKTHNEVLL
YYDHIYPFTT SRNVVKQYLS RFSLPWSTAY DDEKLKQKVW DLSSPLETTA KITEFVPLRR
DCGAFVKFKY PPEVPATKFI EEIRENVEKN EQERVNSNIL TKLYHQIWRN VPKVYSVKGT
PWIEDLRRFP SPKLSVKFEG DPLTEEELYV LFRRYGLINE IEPGATEAFI YFHSTRAAIS
AKHCITGMVL NGGKTTLHIQ FVAIKRSNFL VSLISNHTKI AIPVLIALLA TFAVLIFDPI
REWFIEYKIL HNRKSFDQFK ESRWFKYLYI PYRTITGWVY SSYDYIDSQI QEVTGSSCSE
EDDSSNGSNI VDGQSVRDLK NESNMFWIER YEKSKQLQLW IMENANTFII VKGPQGSGKE
EFVLEHSLGS DERLNKKVLV LECDQLGKAR SDNNLINTTA SQLGYFPVFT WTNTVSRFVD
LGVQGLTGQK SGLSESKETQ IKNMFSLATQ AIRKITTNEY NKYVKSVERR NKRLKDDEKI
EVLKEEQFLQ QHPEAKPIIV LNKYSRRADV SSNDFIPPLV ADWASGLVQN NTAHVIFLTA
DVGSLQLLND ALPNQVFKDI SLSDASMSSS RQYVCDVLKV KDTSTLDECL EPLGGRMLDL
QSFIRRIKSG ESPQQAINEM ISQAAELINT FFLNSHHKFG AGDSNWDPSQ VWLIMKLLSE
CDTINYSELV KSPLFKVSKE TLEILTTLEK YDLISLKRDK GVLDKISTGR PLFKAAFANI
ISDLRIWKLY ETEYIGRLIS LEAAKIQKLE EELEKIYKIG KVDGRIDYVS QKIEASNKKI
LDLEKQAADV ASYTGKPDGK SFLGIKF