YMFA_ECOLI
ID YMFA_ECOLI Reviewed; 153 AA.
AC P75962;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 29-AUG-2001, sequence version 2.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Inner membrane protein YmfA;
GN Name=ymfA; OrderedLocusNames=b1122, JW5164;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; U00096; AAC74206.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA35942.2; -; Genomic_DNA.
DR PIR; G64856; G64856.
DR RefSeq; NP_415640.2; NC_000913.3.
DR RefSeq; WP_000076376.1; NZ_SSZK01000019.1.
DR AlphaFoldDB; P75962; -.
DR SMR; P75962; -.
DR BioGRID; 4260091; 8.
DR STRING; 511145.b1122; -.
DR TCDB; 9.B.122.1.1; the duf3592 or pf12158 (duf3592) family.
DR PaxDb; P75962; -.
DR PRIDE; P75962; -.
DR EnsemblBacteria; AAC74206; AAC74206; b1122.
DR EnsemblBacteria; BAA35942; BAA35942; BAA35942.
DR GeneID; 945684; -.
DR KEGG; ecj:JW5164; -.
DR KEGG; eco:b1122; -.
DR PATRIC; fig|1411691.4.peg.1145; -.
DR EchoBASE; EB3219; -.
DR eggNOG; ENOG503344A; Bacteria.
DR HOGENOM; CLU_144088_0_0_6; -.
DR OMA; SAMINTW; -.
DR BioCyc; EcoCyc:G6579-MON; -.
DR PRO; PR:P75962; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR GO; GO:0071978; P:bacterial-type flagellum-dependent swarming motility; IMP:EcoCyc.
DR InterPro; IPR021994; DUF3592.
DR Pfam; PF12158; DUF3592; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..153
FT /note="Inner membrane protein YmfA"
FT /id="PRO_0000168840"
FT TOPO_DOM 1..6
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 28..116
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 117..137
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 138..153
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 153 AA; 17416 MW; DFD1327C9505EB33 CRC64;
MSQDSKVFFR IFLGIGLVLI LISVVVFYNQ FTYSKDAIHT EGVIVDTVWH SSHSHRTGKD
GSWYPVVAFR PTPDYTLIFN SSIGSDFYED SEGDKVNVYY SPGHPEKAEI NNPWVNFFKW
GFIGIMGVIF IAVGLLISMP SSKKSRRKRK SRP