YMGC_ECOLI
ID YMGC_ECOLI Reviewed; 82 AA.
AC P75994;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Uncharacterized protein YmgC;
GN Name=ymgC; OrderedLocusNames=b1167, JW1154;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP INDUCTION BY LOW TEMPERATURE.
RC STRAIN=K12 / MC4100;
RX PubMed=18174134; DOI=10.1099/mic.0.2007/012021-0;
RA White-Ziegler C.A., Um S., Perez N.M., Berns A.L., Malhowski A.J.,
RA Young S.;
RT "Low temperature (23 degrees C) increases expression of biofilm-, cold-
RT shock- and RpoS-dependent genes in Escherichia coli K-12.";
RL Microbiology 154:148-166(2008).
RN [5]
RP INDUCTION BY COLD, REPRESSION BY YCGE, AND OPERON STRUCTURE.
RC STRAIN=K12 / MC4100;
RX PubMed=19240136; DOI=10.1101/gad.499409;
RA Tschowri N., Busse S., Hengge R.;
RT "The BLUF-EAL protein YcgF acts as a direct anti-repressor in a blue-light
RT response of Escherichia coli.";
RL Genes Dev. 23:522-534(2009).
CC -!- INDUCTION: Strongly induced at 16 degrees. Expression is repressed by
CC YcgE. At 16 degrees Celsius with blue light irradiation, expression of
CC this operon is absolutely dependent on YcgF for relief of YcgE
CC repression. Part of the ycgZ-ymgA-ariR-ymgC operon.
CC {ECO:0000269|PubMed:18174134, ECO:0000269|PubMed:19240136}.
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DR EMBL; U00096; AAC74251.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35999.1; -; Genomic_DNA.
DR PIR; D64862; D64862.
DR RefSeq; NP_415685.1; NC_000913.3.
DR RefSeq; WP_001065752.1; NZ_SSZK01000010.1.
DR AlphaFoldDB; P75994; -.
DR SMR; P75994; -.
DR BioGRID; 4261743; 5.
DR IntAct; P75994; 5.
DR STRING; 511145.b1167; -.
DR PaxDb; P75994; -.
DR PRIDE; P75994; -.
DR EnsemblBacteria; AAC74251; AAC74251; b1167.
DR EnsemblBacteria; BAA35999; BAA35999; BAA35999.
DR GeneID; 66675017; -.
DR GeneID; 945090; -.
DR KEGG; ecj:JW1154; -.
DR KEGG; eco:b1167; -.
DR PATRIC; fig|511145.12.peg.1207; -.
DR EchoBASE; EB4039; -.
DR eggNOG; ENOG502ZRUM; Bacteria.
DR HOGENOM; CLU_182842_0_0_6; -.
DR OMA; YIIDQAL; -.
DR BioCyc; EcoCyc:G6607-MON; -.
DR PRO; PR:P75994; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0044010; P:single-species biofilm formation; IMP:EcoCyc.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..82
FT /note="Uncharacterized protein YmgC"
FT /id="PRO_0000168864"
SQ SEQUENCE 82 AA; 9701 MW; C9D908D1A004B017 CRC64;
MNNSIPERFI FQCALFKNLE REVFMTHGYV DSHIIDQALR LRLKDETSVI LSDLYLQILQ
YIEMHKTTLT DIIINDRESV LS