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YMYD_CAEEL
ID   YMYD_CAEEL              Reviewed;         139 AA.
AC   Q9BIB4;
DT   23-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2001, sequence version 1.
DT   03-AUG-2022, entry version 124.
DE   RecName: Full=Transcription initiation factor IIA small chain homolog;
GN   ORFNames=B0336.13;
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG   The C. elegans sequencing consortium;
RT   "Genome sequence of the nematode C. elegans: a platform for investigating
RT   biology.";
RL   Science 282:2012-2018(1998).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the TFIIA subunit 2 family. {ECO:0000305}.
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DR   EMBL; FO080138; CCD61534.1; -; Genomic_DNA.
DR   RefSeq; NP_498226.1; NM_065825.3.
DR   AlphaFoldDB; Q9BIB4; -.
DR   SMR; Q9BIB4; -.
DR   BioGRID; 41018; 7.
DR   STRING; 6239.B0336.13; -.
DR   EPD; Q9BIB4; -.
DR   PaxDb; Q9BIB4; -.
DR   PeptideAtlas; Q9BIB4; -.
DR   EnsemblMetazoa; B0336.13.1; B0336.13.1; WBGene00015150.
DR   UCSC; B0336.13; c. elegans.
DR   WormBase; B0336.13; CE26429; WBGene00015150; -.
DR   eggNOG; KOG3463; Eukaryota.
DR   GeneTree; ENSGT00390000014572; -.
DR   HOGENOM; CLU_112964_1_1_1; -.
DR   InParanoid; Q9BIB4; -.
DR   OMA; CICTALS; -.
DR   OrthoDB; 1589933at2759; -.
DR   PhylomeDB; Q9BIB4; -.
DR   PRO; PR:Q9BIB4; -.
DR   Proteomes; UP000001940; Chromosome III.
DR   Bgee; WBGene00015150; Expressed in germ line (C elegans) and 4 other tissues.
DR   GO; GO:0005672; C:transcription factor TFIIA complex; IBA:GO_Central.
DR   GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IBA:GO_Central.
DR   GO; GO:0017025; F:TBP-class protein binding; IBA:GO_Central.
DR   GO; GO:0051123; P:RNA polymerase II preinitiation complex assembly; IBA:GO_Central.
DR   CDD; cd10014; TFIIA_gamma_C; 1.
DR   CDD; cd10145; TFIIA_gamma_N; 1.
DR   Gene3D; 1.10.287.190; -; 1.
DR   Gene3D; 2.30.18.10; -; 1.
DR   InterPro; IPR009083; TFIIA_a-hlx.
DR   InterPro; IPR009088; TFIIA_b-brl.
DR   InterPro; IPR003194; TFIIA_gsu.
DR   InterPro; IPR015871; TFIIA_gsu_C.
DR   InterPro; IPR015872; TFIIA_gsu_N.
DR   PANTHER; PTHR10966; PTHR10966; 1.
DR   Pfam; PF02751; TFIIA_gamma_C; 1.
DR   Pfam; PF02268; TFIIA_gamma_N; 1.
DR   SUPFAM; SSF50784; SSF50784; 1.
PE   3: Inferred from homology;
KW   Nucleus; Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..139
FT                   /note="Transcription initiation factor IIA small chain
FT                   homolog"
FT                   /id="PRO_0000194054"
FT   REGION          113..139
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   139 AA;  15571 MW;  7D468A14E80F895D CRC64;
     MSSYALYRGT TLGQALDKTL EDMESEGLLT KSLASKVLQQ FDKSMNKQIS RLPKEKMNFC
     ATQLLTYRYC DNVWTFILNN VTLKDPQRSF DEPIDKLKVV ACDGRQTSLL QTLSAQGPSK
     RVNRAHAAAA GDDEDDDSD
 
 
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