YMYD_CAEEL
ID YMYD_CAEEL Reviewed; 139 AA.
AC Q9BIB4;
DT 23-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Transcription initiation factor IIA small chain homolog;
GN ORFNames=B0336.13;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TFIIA subunit 2 family. {ECO:0000305}.
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DR EMBL; FO080138; CCD61534.1; -; Genomic_DNA.
DR RefSeq; NP_498226.1; NM_065825.3.
DR AlphaFoldDB; Q9BIB4; -.
DR SMR; Q9BIB4; -.
DR BioGRID; 41018; 7.
DR STRING; 6239.B0336.13; -.
DR EPD; Q9BIB4; -.
DR PaxDb; Q9BIB4; -.
DR PeptideAtlas; Q9BIB4; -.
DR EnsemblMetazoa; B0336.13.1; B0336.13.1; WBGene00015150.
DR UCSC; B0336.13; c. elegans.
DR WormBase; B0336.13; CE26429; WBGene00015150; -.
DR eggNOG; KOG3463; Eukaryota.
DR GeneTree; ENSGT00390000014572; -.
DR HOGENOM; CLU_112964_1_1_1; -.
DR InParanoid; Q9BIB4; -.
DR OMA; CICTALS; -.
DR OrthoDB; 1589933at2759; -.
DR PhylomeDB; Q9BIB4; -.
DR PRO; PR:Q9BIB4; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00015150; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005672; C:transcription factor TFIIA complex; IBA:GO_Central.
DR GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IBA:GO_Central.
DR GO; GO:0017025; F:TBP-class protein binding; IBA:GO_Central.
DR GO; GO:0051123; P:RNA polymerase II preinitiation complex assembly; IBA:GO_Central.
DR CDD; cd10014; TFIIA_gamma_C; 1.
DR CDD; cd10145; TFIIA_gamma_N; 1.
DR Gene3D; 1.10.287.190; -; 1.
DR Gene3D; 2.30.18.10; -; 1.
DR InterPro; IPR009083; TFIIA_a-hlx.
DR InterPro; IPR009088; TFIIA_b-brl.
DR InterPro; IPR003194; TFIIA_gsu.
DR InterPro; IPR015871; TFIIA_gsu_C.
DR InterPro; IPR015872; TFIIA_gsu_N.
DR PANTHER; PTHR10966; PTHR10966; 1.
DR Pfam; PF02751; TFIIA_gamma_C; 1.
DR Pfam; PF02268; TFIIA_gamma_N; 1.
DR SUPFAM; SSF50784; SSF50784; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..139
FT /note="Transcription initiation factor IIA small chain
FT homolog"
FT /id="PRO_0000194054"
FT REGION 113..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 139 AA; 15571 MW; 7D468A14E80F895D CRC64;
MSSYALYRGT TLGQALDKTL EDMESEGLLT KSLASKVLQQ FDKSMNKQIS RLPKEKMNFC
ATQLLTYRYC DNVWTFILNN VTLKDPQRSF DEPIDKLKVV ACDGRQTSLL QTLSAQGPSK
RVNRAHAAAA GDDEDDDSD