YNFA_ECOLI
ID YNFA_ECOLI Reviewed; 108 AA.
AC P76169; Q2MB80;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=UPF0060 membrane protein YnfA {ECO:0000255|HAMAP-Rule:MF_00010};
GN Name=ynfA {ECO:0000255|HAMAP-Rule:MF_00010};
GN OrderedLocusNames=b1582, JW1574;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP SUBCELLULAR LOCATION, AND TOPOLOGY.
RC STRAIN=K12 / JM109 / ATCC 53323;
RX PubMed=11867724; DOI=10.1073/pnas.052018199;
RA Drew D., Sjoestrand D., Nilsson J., Urbig T., Chin C.-N., de Gier J.-W.,
RA von Heijne G.;
RT "Rapid topology mapping of Escherichia coli inner-membrane proteins by
RT prediction and PhoA/GFP fusion analysis.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:2690-2695(2002).
RN [4]
RP SUBCELLULAR LOCATION, AND TOPOLOGY.
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_00010, ECO:0000269|PubMed:11867724,
CC ECO:0000269|PubMed:15919996}; Multi-pass membrane protein
CC {ECO:0000255|HAMAP-Rule:MF_00010, ECO:0000269|PubMed:11867724,
CC ECO:0000269|PubMed:15919996}.
CC -!- SIMILARITY: Belongs to the UPF0060 family. {ECO:0000255|HAMAP-
CC Rule:MF_00010}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; U00096; AAC74654.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76476.1; -; Genomic_DNA.
DR PIR; H64913; H64913.
DR RefSeq; NP_416099.1; NC_000913.3.
DR RefSeq; WP_000598292.1; NZ_STEB01000003.1.
DR AlphaFoldDB; P76169; -.
DR BioGRID; 4260820; 20.
DR STRING; 511145.b1582; -.
DR TCDB; 2.A.7.26.1; the drug/metabolite transporter (dmt) superfamily.
DR PaxDb; P76169; -.
DR PRIDE; P76169; -.
DR DNASU; 946125; -.
DR EnsemblBacteria; AAC74654; AAC74654; b1582.
DR EnsemblBacteria; BAE76476; BAE76476; BAE76476.
DR GeneID; 66674528; -.
DR GeneID; 946125; -.
DR KEGG; ecj:JW1574; -.
DR KEGG; eco:b1582; -.
DR PATRIC; fig|1411691.4.peg.680; -.
DR EchoBASE; EB3600; -.
DR eggNOG; COG1742; Bacteria.
DR HOGENOM; CLU_117653_2_1_6; -.
DR InParanoid; P76169; -.
DR OMA; WLWAVEG; -.
DR PhylomeDB; P76169; -.
DR BioCyc; EcoCyc:G6840-MON; -.
DR PRO; PR:P76169; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005887; C:integral component of plasma membrane; IDA:EcoliWiki.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR HAMAP; MF_00010; UPF0060; 1.
DR InterPro; IPR003844; UPF0060.
DR PANTHER; PTHR36116; PTHR36116; 1.
DR Pfam; PF02694; UPF0060; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..108
FT /note="UPF0060 membrane protein YnfA"
FT /id="PRO_0000162329"
FT TOPO_DOM 1..5
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TRANSMEM 6..26
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TOPO_DOM 27..30
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TRANSMEM 31..51
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TOPO_DOM 52..60
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TRANSMEM 61..81
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TOPO_DOM 82..84
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TRANSMEM 85..105
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
FT TOPO_DOM 106..108
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00010"
SQ SEQUENCE 108 AA; 11920 MW; 16319B7E35F2D1AF CRC64;
MIKTTLLFFA TALCEIIGCF LPWLWLKRNA SIWLLLPAGI SLALFVWLLT LHPAASGRVY
AAYGGVYVCT ALMWLRVVDG VKLTLYDWTG ALIALCGMLI IVAGWGRT