YNJC_ECOLI
ID YNJC_ECOLI Reviewed; 511 AA.
AC P76224; P76908;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-1998, sequence version 2.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Inner membrane ABC transporter permease protein YnjC;
GN Name=ynjC; OrderedLocusNames=b1755, JW5285;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND SEQUENCE REVISION.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- FUNCTION: Probably part of the binding-protein-dependent transport
CC system YnjCD. Probably responsible for the translocation of the
CC substrate across the membrane.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the binding-protein-dependent transport system
CC permease family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA15546.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; U00096; AAC74825.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA15546.2; ALT_INIT; Genomic_DNA.
DR PIR; C64935; C64935.
DR RefSeq; NP_416269.4; NC_000913.3.
DR RefSeq; WP_000224958.1; NZ_SSZK01000001.1.
DR AlphaFoldDB; P76224; -.
DR BioGRID; 4262127; 215.
DR ComplexPortal; CPX-4465; YnjBCD ABC transporter complex.
DR STRING; 511145.b1755; -.
DR PaxDb; P76224; -.
DR PRIDE; P76224; -.
DR EnsemblBacteria; AAC74825; AAC74825; b1755.
DR EnsemblBacteria; BAA15546; BAA15546; BAA15546.
DR GeneID; 946273; -.
DR KEGG; ecj:JW5285; -.
DR KEGG; eco:b1755; -.
DR PATRIC; fig|1411691.4.peg.500; -.
DR EchoBASE; EB3761; -.
DR eggNOG; COG4135; Bacteria.
DR HOGENOM; CLU_026097_1_0_6; -.
DR OMA; WQWLSQG; -.
DR BioCyc; EcoCyc:YNJC-MON; -.
DR PRO; PR:P76224; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0055052; C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing; IC:ComplexPortal.
DR GO; GO:0016020; C:membrane; IC:ComplexPortal.
DR GO; GO:0005886; C:plasma membrane; ISM:EcoCyc.
DR GO; GO:0055085; P:transmembrane transport; IC:ComplexPortal.
DR CDD; cd06261; TM_PBP2; 1.
DR Gene3D; 1.10.3720.10; -; 2.
DR InterPro; IPR000515; MetI-like.
DR InterPro; IPR035906; MetI-like_sf.
DR Pfam; PF00528; BPD_transp_1; 1.
DR SUPFAM; SSF161098; SSF161098; 2.
DR PROSITE; PS50928; ABC_TM1; 2.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome; Repeat;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..511
FT /note="Inner membrane ABC transporter permease protein
FT YnjC"
FT /id="PRO_0000060263"
FT TOPO_DOM 1..8
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 9..29
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 30..62
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 63..83
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 84..91
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 92..112
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 113..130
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 131..151
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 152..189
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 190..210
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 211..239
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 240..260
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 261..284
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 285..305
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 306..318
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 319..339
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 340..345
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 346..366
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 367..374
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 375..395
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 396..432
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 433..453
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 454..485
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 486..506
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TOPO_DOM 507..511
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 54..255
FT /note="ABC transmembrane type-1 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT DOMAIN 315..496
FT /note="ABC transmembrane type-1 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
SQ SEQUENCE 511 AA; 56243 MW; 07CDFCCE729BF369 CRC64;
MATPLRYALI FLLWAMVAVI YAPLIPAALT LISPALSLTH WQALFADPQL PQALLATLVS
TTIAAVGALL IALLVIVALW PGPKWQRMCA RLPWLLAIPH VAFATSALLL FADGGLLYDY
FPYFTPPMDR FGIGLGLTLA VKESAFLLWI LAAVLSEKWL LQQVIVLDSL GYSRWQCLNW
LLLPSVAPAL AMAMLAIVAW SLSVVDVAII LGPGNPPTLA VISWQWLTQG DIDQQTKGAL
ASLLLMLLLA AYVLLSYLLW RSWRRTIPRV DGVRKPATPL LPGNTLAIFL PLTGVLCVVL
LAILADQSTI NSEALINSLT MGLVATFIAL LLLLLWLEWG PQRRQLWLWL PILLPALPLV
AGQYTLALWL KLDGSWTAVV WGHLLWVMPW MLFILQPAWQ RIDSRLILIA QTLGWSRAKI
FFYVKCPLML RPVLIAFAVG FAVGIAQYMP TLWLGAGRFP TLTTEAVALS SGGSNGILAA
QALWQLLLPL IIFALTALVA KWVGYVRQGL R
