YNJI_ECOLI
ID YNJI_ECOLI Reviewed; 346 AA.
AC P76228; Q2MB32; Q47665;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2000, sequence version 2.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Inner membrane protein YnjI;
GN Name=ynjI; OrderedLocusNames=b1762, JW5288;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-36.
RC STRAIN=HMS-83;
RX PubMed=2553698; DOI=10.1016/s0021-9258(19)84661-6;
RA Digate R.J., Marians K.J.;
RT "Molecular cloning and DNA sequence analysis of Escherichia coli topB, the
RT gene encoding topoisomerase III.";
RL J. Biol. Chem. 264:17924-17930(1989).
RN [4]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; U00096; AAC74832.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE76524.1; -; Genomic_DNA.
DR EMBL; J05076; AAA83924.1; -; Genomic_DNA.
DR PIR; B64936; B64936.
DR RefSeq; NP_416276.4; NC_000913.3.
DR RefSeq; WP_000756910.1; NZ_LN832404.1.
DR AlphaFoldDB; P76228; -.
DR SMR; P76228; -.
DR BioGRID; 4259136; 10.
DR STRING; 511145.b1762; -.
DR PaxDb; P76228; -.
DR PRIDE; P76228; -.
DR EnsemblBacteria; AAC74832; AAC74832; b1762.
DR EnsemblBacteria; BAE76524; BAE76524; BAE76524.
DR GeneID; 946239; -.
DR KEGG; ecj:JW5288; -.
DR KEGG; eco:b1762; -.
DR PATRIC; fig|1411691.4.peg.492; -.
DR EchoBASE; EB3767; -.
DR eggNOG; ENOG5032Q3H; Bacteria.
DR HOGENOM; CLU_069576_0_0_6; -.
DR OMA; SWMTSIS; -.
DR BioCyc; EcoCyc:G6956-MON; -.
DR PRO; PR:P76228; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR009677; DUF1266.
DR Pfam; PF06889; DUF1266; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..346
FT /note="Inner membrane protein YnjI"
FT /id="PRO_0000169009"
FT TOPO_DOM 1..38
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 39..59
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 60..68
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 69..89
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 90..234
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 235..255
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 256..346
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CONFLICT 36
FT /note="A -> G (in Ref. 3; AAA83924)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 346 AA; 40346 MW; 0AD0CBA64F58B44F CRC64;
MKKVLLQNHP GSEKYSFNGW EIFNSNFERM IKENKAMLLC KWGFYLTCVV AVMFVFAAIT
SNGLNERGLI TAGCSFLYLL IMMGLIVRAG FKAKKEQLHY YQAKGIEPLS IEKLQALQLI
APYRFYHKQW SETLEFWPRK PEPGKDTFQY HVLPFDSIDI ISKRRESLED QWGIEDSESY
CALMEHFLSG DHGANTFKAN MEEAPEQVIA LLNKFAVFPS DYISDCANHS SGKSSAKLIW
AAELSWMISI SSTAFQNGTI EEELAWHYIM LASRKAHELF ESEEDYQKNS QMGFLYWHIC
CYRRKLTDAE LEACYRYDKQ FWEHYSKKCR WPIRNVPWGA SSVKYS