YNTB_SCHPO
ID YNTB_SCHPO Reviewed; 502 AA.
AC Q9Y7M8;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Probable RNA exonuclease C9B6.11c;
DE EC=3.1.-.-;
GN ORFNames=SPBC9B6.11c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1] {ECO:0000312|EMBL:CAB42372.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2] {ECO:0000305}
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus
CC {ECO:0000269|PubMed:16823372}.
CC -!- SIMILARITY: Belongs to the CCR4/nocturin family. {ECO:0000255}.
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DR EMBL; CU329671; CAB42372.1; -; Genomic_DNA.
DR PIR; T40792; T40792.
DR RefSeq; NP_595753.1; NM_001021653.2.
DR AlphaFoldDB; Q9Y7M8; -.
DR SMR; Q9Y7M8; -.
DR BioGRID; 277799; 15.
DR STRING; 4896.SPBC9B6.11c.1; -.
DR iPTMnet; Q9Y7M8; -.
DR MaxQB; Q9Y7M8; -.
DR PaxDb; Q9Y7M8; -.
DR PRIDE; Q9Y7M8; -.
DR EnsemblFungi; SPBC9B6.11c.1; SPBC9B6.11c.1:pep; SPBC9B6.11c.
DR GeneID; 2541286; -.
DR KEGG; spo:SPBC9B6.11c; -.
DR PomBase; SPBC9B6.11c; -.
DR VEuPathDB; FungiDB:SPBC9B6.11c; -.
DR eggNOG; KOG2338; Eukaryota.
DR HOGENOM; CLU_034867_0_0_1; -.
DR InParanoid; Q9Y7M8; -.
DR OMA; LFPTSDC; -.
DR PhylomeDB; Q9Y7M8; -.
DR PRO; PR:Q9Y7M8; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005737; C:cytoplasm; HDA:PomBase.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IBA:GO_Central.
DR GO; GO:0004521; F:endoribonuclease activity; ISO:PomBase.
DR GO; GO:0004535; F:poly(A)-specific ribonuclease activity; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; ISO:PomBase.
DR Gene3D; 3.60.10.10; -; 1.
DR InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR InterPro; IPR005135; Endo/exonuclease/phosphatase.
DR Pfam; PF03372; Exo_endo_phos; 1.
DR SUPFAM; SSF56219; SSF56219; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Exonuclease; Hydrolase; Nuclease; Nucleus; Reference proteome.
FT CHAIN 1..502
FT /note="Probable RNA exonuclease C9B6.11c"
FT /id="PRO_0000316917"
FT REGION 338..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 341..362
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 363..379
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 502 AA; 57651 MW; 54DFE2E7613B1A86 CRC64;
MYTCPKTCTL TLKFFIDRFH TDYRLSKLAI SFFDQKKNKM ADSIPVKKKG SAKGPPSFVT
PEYIEKQRQK KLEKMAKKAA RKPIAPPSNA PPEFNTDFIK REMLSIPNYA PFETEKSALD
ITIMTYNVLA QTNIRRSMFP HSGEALKWKN RSRMLANELT YYSPTLGCMQ EVDAEFVPNF
YKKLLGGLGY ELHFIKGEGK THGIMIFWKS SLFKKVQDLT IYYDDHDELP GRMNTKNIGC
CVRLERVDDP SRGLFLATTH LFWHPYGSYE RLRQGAILVK EVNKMAQSHP SWPVFIAGDF
NTEPFDTNFP ALTTRPLSIC QRATDIIERS MNYVFGESEL EEKNASTKTE NDSNEDDKEE
CQSSSTSSVP ESTASTPKKR ILHVQNDYVP HYRSFYQQHE QNPVLFSLYS VGYKLVHPEN
AKNTFDHPAF TNWAHAYQGH LDYIFVMNRD TSLQTPENQV VEGIKLKALL RVPLPSEMKE
AEPLEGRYPS DHVALMANVQ IV