YOBD_ECOLI
ID YOBD_ECOLI Reviewed; 152 AA.
AC P67601; P76263; Q2MB20;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=UPF0266 membrane protein YobD;
GN Name=yobD; OrderedLocusNames=b1820, JW1809;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the UPF0266 family. {ECO:0000305}.
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DR EMBL; U00096; AAC74890.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76536.1; -; Genomic_DNA.
DR PIR; D64943; D64943.
DR RefSeq; NP_416334.1; NC_000913.3.
DR RefSeq; WP_000156255.1; NZ_STEB01000009.1.
DR AlphaFoldDB; P67601; -.
DR BioGRID; 4259151; 20.
DR IntAct; P67601; 1.
DR STRING; 511145.b1820; -.
DR PaxDb; P67601; -.
DR PRIDE; P67601; -.
DR EnsemblBacteria; AAC74890; AAC74890; b1820.
DR EnsemblBacteria; BAE76536; BAE76536; BAE76536.
DR GeneID; 66674291; -.
DR GeneID; 946343; -.
DR KEGG; ecj:JW1809; -.
DR KEGG; eco:b1820; -.
DR PATRIC; fig|1411691.4.peg.431; -.
DR EchoBASE; EB3706; -.
DR eggNOG; COG4811; Bacteria.
DR HOGENOM; CLU_133645_0_0_6; -.
DR OMA; LYLFWIR; -.
DR PhylomeDB; P67601; -.
DR BioCyc; EcoCyc:G6998-MON; -.
DR PRO; PR:P67601; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR HAMAP; MF_01071; UPF0266; 1.
DR InterPro; IPR009328; DUF986.
DR Pfam; PF06173; DUF986; 1.
DR PIRSF; PIRSF020687; UCP020687; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..152
FT /note="UPF0266 membrane protein YobD"
FT /id="PRO_0000218112"
FT TOPO_DOM 1..5
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 6..26
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 27..44
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 45..65
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 66
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 88..152
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 152 AA; 17615 MW; 06DCD3B44BC8BE19 CRC64;
MTITDLVLIL FIAALLAFAI YDQFIMPRRN GPTLLAIPLL RRGRIDSVIF VGLIVILIYN
NVTNHGALIT TWLLSALALM GFYIFWIRVP KIIFKQKGFF FANVWIEYSR IKAMNLSEDG
VLVMQLEQRR LLIRVRNIDD LEKIYKLLVS TQ