YOBD_SHIFL
ID YOBD_SHIFL Reviewed; 158 AA.
AC Q83L78;
DT 19-JUL-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=UPF0266 membrane protein YobD;
GN Name=yobD; OrderedLocusNames=SF1408, S1523;
OS Shigella flexneri.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Shigella.
OX NCBI_TaxID=623;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=301 / Serotype 2a;
RX PubMed=12384590; DOI=10.1093/nar/gkf566;
RA Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J.,
RA Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L.,
RA Xue Y., Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H.,
RA Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.;
RT "Genome sequence of Shigella flexneri 2a: insights into pathogenicity
RT through comparison with genomes of Escherichia coli K12 and O157.";
RL Nucleic Acids Res. 30:4432-4441(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700930 / 2457T / Serotype 2a;
RX PubMed=12704152; DOI=10.1128/iai.71.5.2775-2786.2003;
RA Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G.,
RA Mayhew G.F., Plunkett G. III, Rose D.J., Darling A., Mau B., Perna N.T.,
RA Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R.;
RT "Complete genome sequence and comparative genomics of Shigella flexneri
RT serotype 2a strain 2457T.";
RL Infect. Immun. 71:2775-2786(2003).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UPF0266 family. {ECO:0000305}.
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DR EMBL; AE005674; AAN43009.1; -; Genomic_DNA.
DR EMBL; AE014073; AAP16904.1; -; Genomic_DNA.
DR RefSeq; NP_707302.1; NC_004337.2.
DR RefSeq; WP_000156246.1; NZ_WPGW01000062.1.
DR AlphaFoldDB; Q83L78; -.
DR STRING; 198214.SF1408; -.
DR EnsemblBacteria; AAN43009; AAN43009; SF1408.
DR EnsemblBacteria; AAP16904; AAP16904; S1523.
DR GeneID; 1024400; -.
DR GeneID; 58390574; -.
DR KEGG; sfl:SF1408; -.
DR KEGG; sfx:S1523; -.
DR PATRIC; fig|198214.7.peg.1660; -.
DR HOGENOM; CLU_133645_0_0_6; -.
DR OMA; LYLFWIR; -.
DR OrthoDB; 1372043at2; -.
DR Proteomes; UP000001006; Chromosome.
DR Proteomes; UP000002673; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR HAMAP; MF_01071; UPF0266; 1.
DR InterPro; IPR009328; DUF986.
DR Pfam; PF06173; DUF986; 1.
DR PIRSF; PIRSF020687; UCP020687; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..158
FT /note="UPF0266 membrane protein YobD"
FT /id="PRO_0000218122"
FT TOPO_DOM 1..5
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 6..26
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 27..44
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 45..65
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 66
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 88..158
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 158 AA; 18167 MW; 7ACF27CD30F816C5 CRC64;
MTITDLVLIL FIAALLAFAI YDQFIMPRRN GPTLLAIPLL RRGRIDSVIF VGLIVILIYN
NVTNHGALIT TWLLSALALM GFYIFWIRIP KIIFKQKGFF FANVWIEYSR IKAMNLSEDG
VLVMQLEQRR LLIRVRNIDD LEKIYKLLVS GNAANLLI
