YOC5_SCHPO
ID YOC5_SCHPO Reviewed; 384 AA.
AC O42707; Q7LWC7;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 2.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=L-type lectin-like domain-containing protein C4F6.05c;
DE Flags: Precursor;
GN ORFNames=SPBC4F6.05c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1] {ECO:0000312|EMBL:CAA20725.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2] {ECO:0000305, ECO:0000312|EMBL:BAA24901.1}
RP NUCLEOTIDE SEQUENCE [MRNA] OF 240-384.
RA Kawamukai M.;
RT "S.pombe unknown protein.";
RL Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000305}
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass type I
CC membrane protein {ECO:0000305}. Endoplasmic reticulum
CC {ECO:0000269|PubMed:16823372}. Golgi apparatus
CC {ECO:0000269|PubMed:16823372}.
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DR EMBL; CU329671; CAA20725.1; -; Genomic_DNA.
DR EMBL; AB011009; BAA24901.1; -; mRNA.
DR PIR; T40502; T40502.
DR PIR; T43322; T43322.
DR RefSeq; NP_596105.1; NM_001022022.2.
DR AlphaFoldDB; O42707; -.
DR SMR; O42707; -.
DR BioGRID; 277394; 2.
DR STRING; 4896.SPBC4F6.05c.1; -.
DR MaxQB; O42707; -.
DR PaxDb; O42707; -.
DR EnsemblFungi; SPBC4F6.05c.1; SPBC4F6.05c.1:pep; SPBC4F6.05c.
DR GeneID; 2540877; -.
DR KEGG; spo:SPBC4F6.05c; -.
DR PomBase; SPBC4F6.05c; -.
DR VEuPathDB; FungiDB:SPBC4F6.05c; -.
DR eggNOG; KOG3839; Eukaryota.
DR HOGENOM; CLU_719928_0_0_1; -.
DR InParanoid; O42707; -.
DR OMA; RMGLFIC; -.
DR PhylomeDB; O42707; -.
DR Reactome; R-SPO-9013106; RHOC GTPase cycle.
DR PRO; PR:O42707; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0030134; C:COPII-coated ER to Golgi transport vesicle; ISS:PomBase.
DR GO; GO:0005783; C:endoplasmic reticulum; HDA:PomBase.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IBA:GO_Central.
DR GO; GO:0005794; C:Golgi apparatus; HDA:PomBase.
DR GO; GO:0000139; C:Golgi membrane; ISS:PomBase.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005537; F:mannose binding; IBA:GO_Central.
DR GO; GO:0007029; P:endoplasmic reticulum organization; IBA:GO_Central.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; ISS:PomBase.
DR GO; GO:0007030; P:Golgi organization; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IC:PomBase.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR005052; Lectin_leg.
DR Pfam; PF03388; Lectin_leg-like; 1.
DR SUPFAM; SSF49899; SSF49899; 1.
DR PROSITE; PS51328; L_LECTIN_LIKE; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; Golgi apparatus; Membrane; Reference proteome;
KW Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..19
FT /evidence="ECO:0000255"
FT CHAIN 20..384
FT /note="L-type lectin-like domain-containing protein
FT C4F6.05c"
FT /evidence="ECO:0000255"
FT /id="PRO_0000316861"
FT TOPO_DOM 20..353
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 354..374
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 375..384
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 20..224
FT /note="L-type lectin-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00658"
FT REGION 227..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 384 AA; 42768 MW; 0ED322D6AAD28D5F CRC64;
MKFCSLFHVL SFCCTLAYAV PKSQFLQLHS LSNAIPVEWK WYGSVDEDSG YVYLTSKDSN
EARSGSLWST SVLRQVGWQL STSFVAHVSE NENTFFAIWY TSAVGSEGPV FGASDKWDGL
LISQEIDQTG KIFVRGYLND KSFELAQFTD PDLPPFAKCT IESSPEALNN IILKYGDQSG
LELFVNDKPC FQVKDVILPQ GYYFGVSSQS TSAKDLVALS NLNILPPDTS NNENLNPTSN
TKQSVGDNTS PQTVIDTEGL NAIKADLAKL FNLVESQRQK MDSLHFALTN ALERLNDISS
TSQFPSERFN ALEKLLHDSL SAQSSTADGT SKHLAEFEKE IKKAMGNAYS PYNLTNFMVF
LLLGAIVSYG IMLVRRDRRR HKYL
