YOEB_SYNY3
ID YOEB_SYNY3 Reviewed; 86 AA.
AC P0CJ64;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 08-FEB-2011, sequence version 1.
DT 25-MAY-2022, entry version 29.
DE RecName: Full=Toxin YoeB;
DE EC=3.1.-.-;
DE AltName: Full=Endoribonuclease YoeB;
DE AltName: Full=Putative mRNA interferase YoeB;
GN Name=yoeB; OrderedLocusNames=ssr2754.1;
OS Synechocystis sp. (strain PCC 6803 / Kazusa).
OC Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis;
OC unclassified Synechocystis.
OX NCBI_TaxID=1111708;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27184 / PCC 6803 / N-1;
RX PubMed=8590279; DOI=10.1093/dnares/2.4.153;
RA Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N.,
RA Sugiura M., Tabata S.;
RT "Sequence analysis of the genome of the unicellular cyanobacterium
RT Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region
RT from map positions 64% to 92% of the genome.";
RL DNA Res. 2:153-166(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 6803 / Kazusa;
RX PubMed=8905231; DOI=10.1093/dnares/3.3.109;
RA Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y.,
RA Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T.,
RA Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.,
RA Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence analysis of the genome of the unicellular cyanobacterium
RT Synechocystis sp. strain PCC6803. II. Sequence determination of the entire
RT genome and assignment of potential protein-coding regions.";
RL DNA Res. 3:109-136(1996).
CC -!- FUNCTION: Toxic component of a type II toxin-antitoxin (TA) system. Has
CC RNase activity and preferentially cleaves at the 3'-end of purine
CC ribonucleotides (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms a complex with YefM which inhibits its toxin activity.
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the YoeB family. {ECO:0000305}.
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DR EMBL; BA000022; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; P0CJ64; -.
DR SMR; P0CJ64; -.
DR InParanoid; P0CJ64; -.
DR PhylomeDB; P0CJ64; -.
DR Proteomes; UP000001425; Chromosome.
DR GO; GO:0016892; F:endoribonuclease activity, producing 3'-phosphomonoesters; IBA:GO_Central.
DR GO; GO:0043024; F:ribosomal small subunit binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:1903507; P:negative regulation of nucleic acid-templated transcription; IBA:GO_Central.
DR GO; GO:0045947; P:negative regulation of translational initiation; IBA:GO_Central.
DR GO; GO:0006401; P:RNA catabolic process; IBA:GO_Central.
DR Gene3D; 3.30.2310.20; -; 1.
DR InterPro; IPR035093; RelE/ParE_toxin_dom_sf.
DR InterPro; IPR009614; YoeB_toxin.
DR PANTHER; PTHR38039; PTHR38039; 1.
DR Pfam; PF06769; YoeB_toxin; 1.
DR SUPFAM; SSF143011; SSF143011; 1.
DR TIGRFAMs; TIGR02116; toxin_Txe_YoeB; 1.
PE 3: Inferred from homology;
KW Endonuclease; Hydrolase; Nuclease; Reference proteome; RNA-binding;
KW Toxin-antitoxin system.
FT CHAIN 1..86
FT /note="Toxin YoeB"
FT /id="PRO_0000404328"
FT ACT_SITE 46
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT ACT_SITE 83
FT /note="Proton donor"
FT /evidence="ECO:0000250"
SQ SEQUENCE 86 AA; 10347 MW; 25B32CBF9B97575C CRC64;
MKIAFTELSW HDYLWFQQND KKLLKRINLL IKAIARDPFD GIGKPEPLKA NLSGYWSRRI
NSEHRLVYTI ADRDLLIISC RFHYQR