YOHD_ECOLI
ID YOHD_ECOLI Reviewed; 192 AA.
AC P33366; P76436; Q2MAU3;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1994, sequence version 1.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Inner membrane protein YohD;
GN Name=yohD; OrderedLocusNames=b2136, JW2124;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / BHB2600;
RA Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K.,
RA Church G.M.;
RT "Automated multiplex sequencing of the E.coli genome.";
RL Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the DedA family. {ECO:0000305}.
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DR EMBL; U00007; AAA60498.1; -; Genomic_DNA.
DR EMBL; U00096; AAC75197.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE76613.1; -; Genomic_DNA.
DR PIR; G64981; G64981.
DR RefSeq; NP_416640.2; NC_000913.3.
DR RefSeq; WP_001296821.1; NZ_STEB01000002.1.
DR AlphaFoldDB; P33366; -.
DR BioGRID; 4259177; 87.
DR DIP; DIP-12805N; -.
DR IntAct; P33366; 1.
DR STRING; 511145.b2136; -.
DR PaxDb; P33366; -.
DR PRIDE; P33366; -.
DR EnsemblBacteria; AAC75197; AAC75197; b2136.
DR EnsemblBacteria; BAE76613; BAE76613; BAE76613.
DR GeneID; 946661; -.
DR KEGG; ecj:JW2124; -.
DR KEGG; eco:b2136; -.
DR PATRIC; fig|1411691.4.peg.106; -.
DR EchoBASE; EB1954; -.
DR eggNOG; COG0586; Bacteria.
DR HOGENOM; CLU_044208_7_2_6; -.
DR InParanoid; P33366; -.
DR OMA; FMYGFRI; -.
DR PhylomeDB; P33366; -.
DR BioCyc; EcoCyc:EG12017-MON; -.
DR PRO; PR:P33366; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR032816; SNARE_assoc.
DR Pfam; PF09335; SNARE_assoc; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..192
FT /note="Inner membrane protein YohD"
FT /id="PRO_0000161416"
FT TOPO_DOM 1..40
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 41..61
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 62..121
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 122..142
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 143..159
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 160..180
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 181..192
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 192 AA; 21445 MW; 562347F6A127825F CRC64;
MDLNTLISQY GYAALVIGSL AEGETVTLLG GVAAHQGLLK FPLVVLSVAL GGMIGDQVLY
LCGRRFGGKL LRRFSKHQDK IERAQKLIQR HPYLFVIGTR FMYGFRVIGP TLIGASQLPP
KIFLPLNILG AFAWALIFTT IGYAGGQVIA PWLHNLDQHL KHWVWLILVV VLVVGVRWWL
KRRGKKKPDH QA
