YPFA_BACSU
ID YPFA_BACSU Reviewed; 217 AA.
AC P38491;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1994, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Uncharacterized protein YpfA;
GN Name=ypfA; Synonyms=jofA; OrderedLocusNames=BSU22910;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168 / Marburg / ATCC 6051 / DSM 10 / JCM 1465 / NBRC 13719 / NCIMB
RC 3610 / NRRL NRS-744 / VKM B-501;
RX PubMed=8760912; DOI=10.1099/13500872-142-8-2005;
RA Sorokin A.V., Azevedo V., Zumstein E., Galleron N., Ehrlich S.D.,
RA Serror P.;
RT "Sequence analysis of the Bacillus subtilis chromosome region between the
RT serA and kdg loci cloned in a yeast artificial chromosome.";
RL Microbiology 142:2005-2016(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
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DR EMBL; U11687; AAA85147.1; -; Genomic_DNA.
DR EMBL; L47648; AAC83959.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB14207.1; -; Genomic_DNA.
DR PIR; H69934; H69934.
DR RefSeq; NP_390172.1; NC_000964.3.
DR RefSeq; WP_003230551.1; NZ_JNCM01000036.1.
DR PDB; 5VX6; X-ray; 3.20 A; A/B=2-213.
DR PDBsum; 5VX6; -.
DR AlphaFoldDB; P38491; -.
DR SMR; P38491; -.
DR IntAct; P38491; 5.
DR STRING; 224308.BSU22910; -.
DR PaxDb; P38491; -.
DR PRIDE; P38491; -.
DR EnsemblBacteria; CAB14207; CAB14207; BSU_22910.
DR GeneID; 938984; -.
DR KEGG; bsu:BSU22910; -.
DR PATRIC; fig|224308.179.peg.2498; -.
DR eggNOG; COG5581; Bacteria.
DR OMA; YCFERQL; -.
DR BioCyc; BSUB:BSU22910-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0035438; F:cyclic-di-GMP binding; IEA:InterPro.
DR InterPro; IPR009875; PilZ_domain.
DR InterPro; IPR009926; T3SS_YcgR_PilZN.
DR Pfam; PF07238; PilZ; 1.
DR Pfam; PF12945; YcgR_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..217
FT /note="Uncharacterized protein YpfA"
FT /id="PRO_0000049690"
FT DOMAIN 98..203
FT /note="PilZ"
FT STRAND 4..14
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 17..27
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 32..42
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 56..60
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 66..70
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 73..87
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 110..114
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 121..128
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 130..136
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 148..155
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 162..175
FT /evidence="ECO:0007829|PDB:5VX6"
FT TURN 177..179
FT /evidence="ECO:0007829|PDB:5VX6"
FT STRAND 182..190
FT /evidence="ECO:0007829|PDB:5VX6"
FT HELIX 193..208
FT /evidence="ECO:0007829|PDB:5VX6"
SQ SEQUENCE 217 AA; 25132 MW; 0AEE4EF6E22A2F12 CRC64;
MIEIGENVLL EYIEENELKK AKSKAVSIEN NELLIAYPVD VVTGRTVILH NDMEVTVEFV
GKDEVPYRFI SRIKGKVKDK LQMICLEMPP REKMKRIQRR QYVRTDAVLD VQIQPGNEEE
IRTLSYNISA GGIAVVLADG LSFQSGESLR LIIRLPEEEH TRQIETEAVV RRIFNDPKSE
KRKMTLEYSE IAAGDQQALL QYCIRRQLNK RRKARME
