YPHD_ECOLI
ID YPHD_ECOLI Reviewed; 332 AA.
AC P77315;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 143.
DE RecName: Full=Probable ABC transporter permease protein YphD;
GN Name=yphD; OrderedLocusNames=b2546, JW2530;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9205837; DOI=10.1093/dnares/4.2.91;
RA Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K.,
RA Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T., Oyama S.,
RA Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H.,
RA Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.;
RT "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12
RT genome corresponding to 50.0-68.8 min on the linkage map and analysis of
RT its sequence features.";
RL DNA Res. 4:91-113(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- FUNCTION: Probably part of the binding-protein-dependent transport
CC system YphDEF. Probably responsible for the translocation of the
CC substrate across the membrane.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Multi-pass
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the binding-protein-dependent transport system
CC permease family. AraH/RbsC subfamily. {ECO:0000305}.
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DR EMBL; U00096; AAC75599.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA16448.1; -; Genomic_DNA.
DR PIR; A65032; A65032.
DR RefSeq; NP_417041.1; NC_000913.3.
DR RefSeq; WP_001276670.1; NZ_LN832404.1.
DR AlphaFoldDB; P77315; -.
DR BioGRID; 4261317; 8.
DR ComplexPortal; CPX-4468; YphDEF ABC transporter complex.
DR STRING; 511145.b2546; -.
DR TCDB; 3.A.1.2.27; the atp-binding cassette (abc) superfamily.
DR PaxDb; P77315; -.
DR PRIDE; P77315; -.
DR EnsemblBacteria; AAC75599; AAC75599; b2546.
DR EnsemblBacteria; BAA16448; BAA16448; BAA16448.
DR GeneID; 949063; -.
DR KEGG; ecj:JW2530; -.
DR KEGG; eco:b2546; -.
DR PATRIC; fig|1411691.4.peg.4188; -.
DR EchoBASE; EB3238; -.
DR eggNOG; COG1172; Bacteria.
DR HOGENOM; CLU_028880_2_2_6; -.
DR InParanoid; P77315; -.
DR OMA; NQYKGLP; -.
DR PhylomeDB; P77315; -.
DR BioCyc; EcoCyc:YPHD-MON; -.
DR PRO; PR:P77315; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0055052; C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing; IC:ComplexPortal.
DR GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
DR GO; GO:0005887; C:integral component of plasma membrane; ISM:EcoCyc.
DR GO; GO:0016020; C:membrane; IC:ComplexPortal.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0055085; P:transmembrane transport; IC:ComplexPortal.
DR InterPro; IPR001851; ABC_transp_permease.
DR Pfam; PF02653; BPD_transp_2; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..332
FT /note="Probable ABC transporter permease protein YphD"
FT /id="PRO_0000060264"
FT TRANSMEM 28..48
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 63..83
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 84..104
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 105..125
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 131..151
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 172..192
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 222..242
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 251..271
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 278..298
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 303..323
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 332 AA; 34483 MW; 226C21E6C6C2F719 CRC64;
MSASSLPLPQ GKSVSLKQFV SRHINEIGLL VVIAILYLVF SLNAPGFISL NNQMNVLRDA
ATIGIAAWAM TLIIISGEID VSVGPMVAFV SVCLAFLLQF EVPLAVACLL VLLLGALMGT
LAGVLRGVFN VPSFVATLGL WSALRGMGLF MTNALPVPID ENEVLDWLGG QFLGVPVSAL
IMIVLFALFV FISRKTAFGR SVFAVGGNAT AAQLCGINVR RVRILIFTLS GLLAAVTGIL
LAARLGSGNA GAANGLEFDV IAAVVVGGTA LSGGRGSLFG TLLGVLVITL IGNGLVLLGI
NSFFQQVVRG VIIVVAVLAN ILLTQRSSKA KR
