YPHF_ECOLI
ID YPHF_ECOLI Reviewed; 327 AA.
AC P77269; P76994;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 134.
DE RecName: Full=ABC transporter periplasmic-binding protein YphF;
DE Flags: Precursor;
GN Name=yphF; OrderedLocusNames=b2548, JW2532;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9205837; DOI=10.1093/dnares/4.2.91;
RA Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K.,
RA Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T., Oyama S.,
RA Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H.,
RA Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.;
RT "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12
RT genome corresponding to 50.0-68.8 min on the linkage map and analysis of
RT its sequence features.";
RL DNA Res. 4:91-113(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP PROTEIN SEQUENCE OF 27-37.
RC STRAIN=K12 / EMG2;
RX PubMed=9298646; DOI=10.1002/elps.1150180807;
RA Link A.J., Robison K., Church G.M.;
RT "Comparing the predicted and observed properties of proteins encoded in the
RT genome of Escherichia coli K-12.";
RL Electrophoresis 18:1259-1313(1997).
CC -!- FUNCTION: Probably part of the binding-protein-dependent transport
CC system YphDEF.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000305}.
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DR EMBL; U00096; AAC75601.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA16457.1; -; Genomic_DNA.
DR PIR; C65032; C65032.
DR RefSeq; NP_417043.1; NC_000913.3.
DR RefSeq; WP_001142427.1; NZ_LN832404.1.
DR AlphaFoldDB; P77269; -.
DR SMR; P77269; -.
DR BioGRID; 4261316; 32.
DR ComplexPortal; CPX-4468; YphDEF ABC transporter complex.
DR IntAct; P77269; 3.
DR STRING; 511145.b2548; -.
DR TCDB; 3.A.1.2.27; the atp-binding cassette (abc) superfamily.
DR jPOST; P77269; -.
DR PaxDb; P77269; -.
DR PRIDE; P77269; -.
DR DNASU; 947020; -.
DR EnsemblBacteria; AAC75601; AAC75601; b2548.
DR EnsemblBacteria; BAA16457; BAA16457; BAA16457.
DR GeneID; 947020; -.
DR KEGG; ecj:JW2532; -.
DR KEGG; eco:b2548; -.
DR PATRIC; fig|1411691.4.peg.4186; -.
DR EchoBASE; EB3240; -.
DR eggNOG; COG1879; Bacteria.
DR HOGENOM; CLU_849644_0_0_6; -.
DR OMA; HYNETMA; -.
DR PhylomeDB; P77269; -.
DR BioCyc; EcoCyc:G7342-MON; -.
DR PRO; PR:P77269; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0055052; C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing; IC:ComplexPortal.
DR GO; GO:0016020; C:membrane; IC:ComplexPortal.
DR GO; GO:0030288; C:outer membrane-bounded periplasmic space; IBA:GO_Central.
DR GO; GO:0030246; F:carbohydrate binding; IBA:GO_Central.
DR GO; GO:0055085; P:transmembrane transport; IC:ComplexPortal.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; SSF53822; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Periplasm; Reference proteome; Signal;
KW Transport.
FT SIGNAL 1..26
FT /evidence="ECO:0000269|PubMed:9298646"
FT CHAIN 27..327
FT /note="ABC transporter periplasmic-binding protein YphF"
FT /id="PRO_0000031744"
SQ SEQUENCE 327 AA; 35058 MW; 3182BC4494FFC766 CRC64;
MPTKMRTTRN LLLMATLLGS ALFARAAEKE MTIGAIYLDT QGYYAGVRQG VQDAAKDSSV
QVQLIETNAQ GDISKESTFV DTLVARNVDA IILSAVSENG SSRTVRRASE AGIPVICYNT
CINQKGVDKY VSAYLVGDPL EFGKKLGNAA ADYFIANKID QPKIAVINCE AFEVCVQRRK
GFEEVLKSRV PGAQIVANQE GTVLDKAISV GEKLIISTPD LNAIMGESGG ATLGAVKAVR
NQNQAGKIAV FGSDMTTEIA QELENNQVLK AVVDISGKKM GNAVFAQTLK VINKQADGEK
VIQVPIDLYT KTEDGKQWLA THVDGLP