YPMB_BACSU
ID YPMB_BACSU Reviewed; 161 AA.
AC P54396;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Uncharacterized protein YpmB;
GN Name=ypmB; OrderedLocusNames=BSU22380;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168 / Marburg / ATCC 6051 / DSM 10 / JCM 1465 / NBRC 13719 / NCIMB
RC 3610 / NRRL NRS-744 / VKM B-501;
RX PubMed=8760912; DOI=10.1099/13500872-142-8-2005;
RA Sorokin A.V., Azevedo V., Zumstein E., Galleron N., Ehrlich S.D.,
RA Serror P.;
RT "Sequence analysis of the Bacillus subtilis chromosome region between the
RT serA and kdg loci cloned in a yeast artificial chromosome.";
RL Microbiology 142:2005-2016(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (1.74 ANGSTROMS) OF 29-161.
RG Midwest center for structural genomics (MCSG);
RT "X-ray crystal structure of ypmB protein from Bacillus subtilis.";
RL Submitted (MAY-2006) to the PDB data bank.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; L47709; AAB38453.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB14154.1; -; Genomic_DNA.
DR PIR; F69938; F69938.
DR RefSeq; NP_390119.1; NC_000964.3.
DR RefSeq; WP_003230665.1; NZ_JNCM01000036.1.
DR PDB; 2GU3; X-ray; 1.74 A; A=29-161.
DR PDBsum; 2GU3; -.
DR AlphaFoldDB; P54396; -.
DR SMR; P54396; -.
DR STRING; 224308.BSU22380; -.
DR PaxDb; P54396; -.
DR PRIDE; P54396; -.
DR DNASU; 939035; -.
DR EnsemblBacteria; CAB14154; CAB14154; BSU_22380.
DR GeneID; 939035; -.
DR KEGG; bsu:BSU22380; -.
DR PATRIC; fig|224308.179.peg.2442; -.
DR eggNOG; COG5353; Bacteria.
DR OMA; WELTYID; -.
DR PhylomeDB; P54396; -.
DR BioCyc; BSUB:BSU22380-MON; -.
DR EvolutionaryTrace; P54396; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR046350; Cystatin_sf.
DR InterPro; IPR041401; DUF5590.
DR InterPro; IPR025711; PepSY.
DR Pfam; PF17881; DUF5590; 1.
DR Pfam; PF03413; PepSY; 1.
DR SUPFAM; SSF54403; SSF54403; 2.
PE 1: Evidence at protein level;
KW 3D-structure; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..161
FT /note="Uncharacterized protein YpmB"
FT /id="PRO_0000049710"
FT TRANSMEM 6..26
FT /note="Helical"
FT /evidence="ECO:0000255"
FT HELIX 38..48
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 49..73
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 78..86
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 92..95
FT /evidence="ECO:0007829|PDB:2GU3"
FT HELIX 96..98
FT /evidence="ECO:0007829|PDB:2GU3"
FT HELIX 102..111
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 116..126
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 129..137
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 143..149
FT /evidence="ECO:0007829|PDB:2GU3"
FT TURN 150..152
FT /evidence="ECO:0007829|PDB:2GU3"
FT STRAND 155..159
FT /evidence="ECO:0007829|PDB:2GU3"
SQ SEQUENCE 161 AA; 17896 MW; 014004D60DDDAC9F CRC64;
MRKKALIFTV IFGIIFLAVL LVSASIYKSA MAQKEEGHEA AAAEAKKETD LAHVDQVETF
VGKEKYYVVK GTDKKGTALY VWVPADKKAK ILSKEAKEGI SEDKAAKIIK DEGLVSKQKE
VHLAREGNVL LWEVTYLDKE GQYSLSYVDF TTGKILKNIT P
